Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc64239g00001 TTTCAGGACTTAGACGTAGATGAACAAATTGAATTGTTGATTCTTGCAAGTGATGGACTTTGGGATGTAGTACCAAATGATGATGCTGTGGCTCTTGCTTGCACAGAAGAGGAGCCGGAGGCAGCTGCGCGTAAGTTAACAGAAGCAGCATTTTCTCGAGGTAGTGTAGACAACATTACATGTATTGTTGTGCGTTTTCATCATGACAAAGTAGAGCCCATTAGTAGAGACAAAGTAGATGCCATTATTTCCGACAAAGTAGATGTCATTGTTCCTAAGAAAGCAGACATCGTTGTTCCTGACAAAGCAAAAGCGACATCAGCCAGTGTCAAGGAAGAAGAGTCTACTTGA 351 0.4217 FQDLDVDEQIELLILASDGLWDVVPNDDAVALACTEEEPEAAARKLTEAAFSRGSVDNITCIVVRFHHDKVEPISRDKVDAIISDKVDVIVPKKADIVVPDKAKATSASVKEEEST 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc64239g00001 116 ProSiteProfiles PPM-type phosphatase domain profile. 1 66 IPR001932 -
Stsc64239g00001 116 SUPERFAMILY PP2C-like 5 67 IPR036457 -
Stsc64239g00001 116 Gene3D - 1 97 IPR036457 -
Stsc64239g00001 116 Pfam Protein phosphatase 2C 6 59 IPR001932 -
Stsc64239g00001 116 PANTHER PROTEIN PHOSPHATASE 9 66 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc64239g00001 Stsc-Chr64239 1020 2172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc64239g00001 2 72 PP2C-type Phosphatase Gene Family AT5G53140 78.873 1.19e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc64239g00001 K17506 - gmx:100805795 130.568