Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc641g00004 ATGAATATAGATTCTTCCACTACTGGCAGTTCCTTTTCTGGTGTGGAGTCTACAGTGGTATCACAGACATCACTGCAGCAGCAGAAGCAGCATGGGCAAAATAGTCATGTTTTGCAGAACATTGGCAGCCAAATGGGTAGTGGAATGAGATCTGCTTTACTGCAAAAATCATTTGGGAACTCAAATGGTGCTGTAAATAGTGGACTTGGCTTGATTGGAAACAGTTTGCAACTTGCAAATGAACCTGGAACTTCTGACGGTTATGTGTCAACCTATGCTAATTCCCCTAAACACTTACAGCAGCACTTCGATCAAAATCAGCAACCAGTTGTTCAGGGTGATGGATATGGATTGAATAATGTTGACACGTTCGCTGCTGGAAACTTTTATGCATCCACAACCACCTCAGGGTCCATGATAAATTCTCAGAACACAAATTCATTAAAATTGGCATCGATACCCAAAACTAGTTCATTGATAAGTGGCCACTCAAATTTGCATGGTATCCAGCAATCTGCTCATATAAAGTCCCAAGCAATGAATCAATTGGAAAAGTTGAGTTTCCAGTCTTCATTGACTTCACGAGATGGCCTTCTGCATTCCCAACAACAACATCAGCAAAGGCCCCAACAATATCAACAGTCAGATCAGTATGCACAGCAGCAATGCCAATTGAAGATGCAAAGTCAGCAACCTCATCATATGGTGAACAATGATACTTGCAGTCAGTCTCAACTGCCTTCCCATCTAGAGAACCGAGTGAAGCCTGAGCCAGGGGTTGAACACCATAAAGAAGTACTCAGTTCTCATGTTCCTGAACAGTTTCATTTGGCTGAGATGCAGAGTCATTTCCACCAGAACTTGGCTGAAGATTGCTCTAGGAGTGATCAACATGTTACATATCCATCTGGTGTACATGACTTGGTTTCATCAACACCTCAAAATTCACAACAAATGTTGCACACACCCCAATTGGTTGCAGAGCCTCAAAATAATCTTAATTGTCTGACAGTTGGGCCACAATCCAAATCTTTAGTTCTAAATCAATGGCCTCAGTCACAAGATGCAAACCATATGCTTGGGAATATTTCACATGAGCAGCATGTCCACATGGACTTCCACCAAAGAATATCAGTGCAGGGTGAAGCTCAGTGCAATAATTTATCGTCAGATGGATCAATCATTGGTCAAGCAGTTGCCTCTAGAGCTTCAGTTGATGTGATAGACTCTGGAAGTGGGGTTAAAAAGGAACACAGGAATCAGCAGAGGTGGCTTTTATTTCTACTTCATGCCCGACGGTGTCCTGCCCCTGAAGGACAGTGCCCAGAACGCTTCTGTTCTAATGCACAGAAGTTATGTAAGCACATAGATGGATGTAAGAAGGTTCATTGTTCATATCCTCGGTGTCATCATACCAGGGTTTTGATTCATCATTTCATGAACTGCAAGGATCCTTGTTGCCCGGTTTGTGTTTTCGTAAAAAATTATCGACGTGCTGTGCAACTTAAGTCTCAGATTCGGTCGGAGCATGAATCAAGTTTGCCAATTACAGTAAATGGGTCCTGTAAATCATATAATACTGTGGCCCCATTGCCTAGAATGATCTCTAAGCCTCCATTAGCTGTTGAAACTTCGGAAGATCTGCACCCATCTATAAAACGTATAAAGACTGAGCATTGCACCACGCAGTCCATGAATCCTGAAAATGACAATTCTTCATCTGTTTCTGCAAATTGTGAATCTCTTATTTCCAGAGATACACAGTCCCTGGGCTATCCAAATGCTGATAAATCTATCTCAATTAAGTCTGAGATTGCTGAAGTTAAGGCTGAAGCTTCAGCACATTTGGTACATGAAAAGCTTAGTGAGATGAAAATGGATAGCAATCATTCAGATAATAAAACATCTGGTGGTGAACCTGTCAAATATGATGAACCCGCTAATTTATGTAGGTCAGAACATGTTAAAACTGAGAAAGAGAGTACACAAGATCAGCAAGAAAATGTGATGCAGCCCTCTGAAAATGCAGCAGGAACCAAGTCTGGCAAGCCAAAAATAAAGGGTGTCTCGTTAACTGAACTATTTACACCTGAGCAAGTCCGGGAGCATATCACTGGCCTAAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAACCAAGCAATGGAGCATTCGATGAGTGAGAATTCTTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCCCCACCAATCTACTGCACAACCTGTGGTGTTCGTATTAAACGAAACAATATGTATTATACCACGGGTGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGCTCAGAGAACATTAACGTGGACGGGACTCCGATTCCTAAGTCAAGATTGGAAAAGAAGAAGAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCCTGGCAACATCAAATTTGTGCCTTATTCAATGGAAGAAGAAATGATGGTGGGCAAGCTGAGTACACTTGCCCAAATTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCTTTACCCCAAAGTGCTGTTCTTGNNNNNNNNNNCCATATAGAACAGCGATTATTTAAAAGACTAAAGCAAGAGAGGCAAGAGAGGGCAAGGCTTCATGGAAAATCTTATGAAGAGGTTCCAGGAGCCGAATCTCTTGTTATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAGCAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCGACAGAATTCCCATATAAATCTAAGGTAATTTTGTTGTTTCAAAAGATCGAAGGTGTGGAAGTCTGTCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCTGTTGCCGAACCAGCGTCGGGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAGGTCAAGGCAGTAACTGGAGAGGCTCTTAGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGTTATATATGGGCCTGTCCACCGTTGAAGGGAGAAGACTATATTTTGTATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTATCTGGCCATGCTAAGAAAAGCTATCAAGGAGAATATTGTGGTTGATCTCACCAACTTATATGATCATTTCTTCGTATCTAATGGCGAATGTAGGGCTAAGGTTACAGCTTCCAGACTCCCGTATTTTGATGGTGACTACTGGCCTGGTGCTGCTGAGGATCTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGGAAACAAAATAAGAAAGGAACAACTAAAAAAACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCGGATCTCTCTGGCAACGCCTCGAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAGGATTTTATCATGGTTCATCTACAGCATGCATGCAGTCATTGTTGTATTCTAATGGTGTCTGGCAACCGATGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATCGGTGCTATGAAGTGGAATTAAAACGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATACCCTTTATCCAATTGAAATCAATGATGTTCCAGTTGATACAAAAGACAAGGATGATATTCTTGAGAGTGAATTCTTTGATACTAGACAGGCATTTCTCAGTCTCTGCCAGGGAAACCATTATCAGTATGATACACTTAGGCGAGCCAAGCATTCATCAATGATGGTTCTATATCATCTTCATAATCCAACGGCTCCTGCATTTGTGACGACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCAGAGTATGATGTGTGTAATGCTTGTTATCAAAAGGATGGAGCCATTGATCATCCCCATAAGTTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGGTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTACTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATACCCAAATTGCCGGAAAGTAAAGGGACTTTTCCGCCATGGGATGCACTGCAAAACACGTGCTTCTGGAGGTTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTCCATGCTCGTGCCTGCAAAGAATCGGAGTGCCACGTGCCGCGTTGCAGGGATTTGAAAGAGCATTTAAGGAGATTGCAGCAACAATCTGATTCACGGCGTAGGGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAATAATGCTGGATGA 4422 0.4184 MNIDSSTTGSSFSGVESTVVSQTSLQQQKQHGQNSHVLQNIGSQMGSGMRSALLQKSFGNSNGAVNSGLGLIGNSLQLANEPGTSDGYVSTYANSPKHLQQHFDQNQQPVVQGDGYGLNNVDTFAAGNFYASTTTSGSMINSQNTNSLKLASIPKTSSLISGHSNLHGIQQSAHIKSQAMNQLEKLSFQSSLTSRDGLLHSQQQHQQRPQQYQQSDQYAQQQCQLKMQSQQPHHMVNNDTCSQSQLPSHLENRVKPEPGVEHHKEVLSSHVPEQFHLAEMQSHFHQNLAEDCSRSDQHVTYPSGVHDLVSSTPQNSQQMLHTPQLVAEPQNNLNCLTVGPQSKSLVLNQWPQSQDANHMLGNISHEQHVHMDFHQRISVQGEAQCNNLSSDGSIIGQAVASRASVDVIDSGSGVKKEHRNQQRWLLFLLHARRCPAPEGQCPERFCSNAQKLCKHIDGCKKVHCSYPRCHHTRVLIHHFMNCKDPCCPVCVFVKNYRRAVQLKSQIRSEHESSLPITVNGSCKSYNTVAPLPRMISKPPLAVETSEDLHPSIKRIKTEHCTTQSMNPENDNSSSVSANCESLISRDTQSLGYPNADKSISIKSEIAEVKAEASAHLVHEKLSEMKMDSNHSDNKTSGGEPVKYDEPANLCRSEHVKTEKESTQDQQENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLXXXXHIEQRLFKRLKQERQERARLHGKSYEEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECLLPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAIKENIVVDLTNLYDHFFVSNGECRAKVTASRLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPINQREKHTLYPIEINDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGAIDHPHKLTNHPSMADRDAQNKEARQVRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc641g00004 1473 CDD PHD_HAC_like 775 847 - -
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 560 579 - -
Stsc641g00004 1473 ProSiteProfiles Zinc finger ZZ-type profile. 1295 1348 IPR000433 GO:0008270
Stsc641g00004 1473 FunFam Histone acetyltransferase HAC1-like protein 1352 1469 - -
Stsc641g00004 1473 SMART KAT11_2 890 1187 IPR013178 GO:0004402|GO:0006355|GO:0016573
Stsc641g00004 1473 ProSiteProfiles Zinc finger TAZ-type profile. 1355 1438 IPR000197 -
Stsc641g00004 1473 SUPERFAMILY TAZ domain 1357 1440 IPR035898 -
Stsc641g00004 1473 Gene3D TAZ domain 1352 1469 IPR035898 -
Stsc641g00004 1473 Pfam Histone acetylation protein 897 1117 IPR013178 GO:0004402|GO:0006355|GO:0016573
Stsc641g00004 1473 Gene3D TAZ domain 410 498 IPR035898 -
Stsc641g00004 1473 ProSiteProfiles Zinc finger TAZ-type profile. 412 493 IPR000197 -
Stsc641g00004 1473 Gene3D - 1294 1346 IPR043145 -
Stsc641g00004 1473 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 857 1293 IPR031162 GO:0004402
Stsc641g00004 1473 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 800 848 IPR013083 -
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 194 244 - -
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 1 42 - -
Stsc641g00004 1473 SMART TAZ_2 1358 1436 IPR000197 -
Stsc641g00004 1473 SMART TAZ_2 416 493 IPR000197 -
Stsc641g00004 1473 ProSiteProfiles Zinc finger ZZ-type profile. 1175 1238 IPR000433 GO:0008270
Stsc641g00004 1473 SUPERFAMILY FYVE/PHD zinc finger 809 849 IPR011011 -
Stsc641g00004 1473 Pfam TAZ zinc finger 1365 1435 IPR000197 -
Stsc641g00004 1473 Pfam TAZ zinc finger 422 490 IPR000197 -
Stsc641g00004 1473 FunFam Histone acetyltransferase of the CBP family 12 1171 1230 - -
Stsc641g00004 1473 SUPERFAMILY RING/U-box 1155 1228 - -
Stsc641g00004 1473 SMART zz_5 1294 1339 IPR000433 GO:0008270
Stsc641g00004 1473 SMART zz_5 1174 1218 IPR000433 GO:0008270
Stsc641g00004 1473 FunFam Histone acetyltransferase HAC1 1294 1345 - -
Stsc641g00004 1473 ProSitePatterns Zinc finger ZZ-type signature. 1300 1327 IPR000433 GO:0008270
Stsc641g00004 1473 ProSitePatterns Zinc finger PHD-type signature. 776 847 IPR019786 -
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 619 685 - -
Stsc641g00004 1473 SUPERFAMILY RING/U-box 1276 1342 - -
Stsc641g00004 1473 Gene3D - 1171 1231 IPR043145 -
Stsc641g00004 1473 Pfam PHD-finger 806 848 IPR019787 -
Stsc641g00004 1473 Pfam Zinc finger, ZZ type 1297 1338 IPR000433 GO:0008270
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 664 678 - -
Stsc641g00004 1473 SUPERFAMILY TAZ domain 418 497 IPR035898 -
Stsc641g00004 1473 MobiDBLite consensus disorder prediction 646 663 - -
Stsc641g00004 1473 PANTHER CBP/P300-RELATED 25 1464 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc641g00004 Stsc-Chr641 19473 28390 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc641g00004 HAT_KAT11 1.5e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc641g00004 K04498 - gmx:100809207 2539.61