Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63g00017 ATGAAAATGGGAAGCCATAGTTACTTGAAGGTTTGGATTCTTTGCCTTACCGCATTAATTGGAGCAACAAGTGCTCAATTAGAACTTGGTTTCTATGCCAAAAGTTGCCCAAAGGCAGAGCAAATCATTTTGAATTATGTTAATCAGCATATCACTAAGGTTCCTTCAATGGCTGCAGCACTCTTAAGGCTTCACTTCCATGACTGTTTTGTAAATGGGTGCGATGGGTCGGTACTTGTGGCATCAACAAAGAACAACCAAGCTGAAAAGGAAGCACCTCCAAACCTAACTCTAAGAGGGTTTGATGTCATTGAAGAGATAAAGAGTATTCTTGAAGCTCAATGTCCTGGAGTTGTTTCTTGTGCCGATATAGTTGCTTTGGCCGCTAGAGATTCAGTTGGTGTCATTGGAGGGCCGCATTGGAATGTTCCGACTGGTAGAAGAGATGGGTTGGTCTCATCGGCAGCCTTAACCTTACAATTCCTTCCGGCTCCATTTCAAAACCTCACCACTCTCATTGCACACTTTACCCAAGTTGGACTTGATATCAAAGATCTTGTCTTGCTCTCTGGTGCTCACACCATAGGAGTTGGCCATTGCTCAACAATCGCAACCCGGATATACAACTTCACCGGAAACGGCGACGCCGACCCATCGCTGGACAGCAACTACGTCCAAAACCTCAAAACCACCAAGTGTAAGAGCATCGGAGACCAAACCACACTCATTGAAATGGACCCCGGAAGTCGCGACTCCTTTGATCTCGGCTACTACAAGCAGCTTCTCAAGAGGAGGGGTTTGTTCCAATCAGATTCTGCTTTGTTGGATAGCGTTGCCACTAGAAACATCATCAACCATGAGCTTTCCTCTCTTGACACTTTCTATAGGGAGTTTGGTATTTCAATGGAGAAGATGGGAAGGATTGGTGTCCTTACTGGCAAACAAGGAGAGATCAGGAAGATCTGTTCAAAAATCAATTAA 981 0.4475 MKMGSHSYLKVWILCLTALIGATSAQLELGFYAKSCPKAEQIILNYVNQHITKVPSMAAALLRLHFHDCFVNGCDGSVLVASTKNNQAEKEAPPNLTLRGFDVIEEIKSILEAQCPGVVSCADIVALAARDSVGVIGGPHWNVPTGRRDGLVSSAALTLQFLPAPFQNLTTLIAHFTQVGLDIKDLVLLSGAHTIGVGHCSTIATRIYNFTGNGDADPSLDSNYVQNLKTTKCKSIGDQTTLIEMDPGSRDSFDLGYYKQLLKRRGLFQSDSALLDSVATRNIINHELSSLDTFYREFGISMEKMGRIGVLTGKQGEIRKICSKIN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63g00017 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 FunFam Peroxidase 163 305 - -
Stsc63g00017 326 Gene3D - 30 326 - -
Stsc63g00017 326 Gene3D Peroxidase, domain 2 163 305 - -
Stsc63g00017 326 FunFam Peroxidase 30 171 - -
Stsc63g00017 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Stsc63g00017 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 PANTHER PEROXIDASE 25-RELATED 17 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Stsc63g00017 326 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc63g00017 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63g00017 Stsc-Chr63 131180 134016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63g00017 11 326 Peroxidase AT4G11290 58.491 7.24e-142 402