Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63932g00001 ATGAGTCTTGAAGATGTAATTGATGAATGTAAATTGTTCTATTTTGCTGGGCAAGAGACAACTTCTGTTTTGCTTGTTTGGACAATGGTGTTACTCAGTAAGCATTCTAAATGGCAAGAAAGAGCAAGGGAGGAAGTGTTGCAGGTCTTTGGTACCCAAAAGCCACACCTTGATGGCTTAAATCGCCTTAAGATTGTCACTATGATACTCTATGAGGTTCTGAGGTTATATCCACCGGTACTCGGACTCAATCGAAGTACGGAGAAAGAGATGAAACTTGGAGATCTAACATTGCCTGAAGGAGTTCACATTTACTTGCCAATTGTTTTGGTTCATCATGATTTTGGACTTTGGGGAGATGATGCAAAACAATTCAACCCTGAAAGATTTTCTGAAGGAGTGTTTAAGGCCACAAATGGCAAAGCTTCTTTCTTCCCATTTGGATGGGGTCCTAGAATCTGCATTGGACAAAACTTCTCCTTAATGGAAGCAAAGCTCGCTTTGTCGCTGATTCTACAACATTTTTCATTTGAACTTTCTCCTTCTTATACTCATGCTCCCATGGTTATGGCTACGCTTCATCCACAACATGGAGCTCATCTCATTTTGCGTAAGGCGAAAACATAA 627 0.4051 MSLEDVIDECKLFYFAGQETTSVLLVWTMVLLSKHSKWQERAREEVLQVFGTQKPHLDGLNRLKIVTMILYEVLRLYPPVLGLNRSTEKEMKLGDLTLPEGVHIYLPIVLVHHDFGLWGDDAKQFNPERFSEGVFKATNGKASFFPFGWGPRICIGQNFSLMEAKLALSLILQHFSFELSPSYTHAPMVMATLHPQHGAHLILRKAKT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63932g00001 208 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 Pfam Cytochrome P450 1 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 199 - -
Stsc63932g00001 208 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 147 156 IPR017972 GO:0005506|GO:0016705
Stsc63932g00001 208 SUPERFAMILY Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63932g00001 208 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63932g00001 Stsc-Chr63932 42 1347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63932g00001 1 205 Cytochrome P450 AT3G14680 70.732 7.81e-106 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63932g00001 - - vum:124844760 344.739