Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63838g00001 ATGGAAATGGAGTTAATACACAAAGAAAGCATGAAACCAAGTTCGGCAACTCCTCCACACCTCAAAACTTATCCCCTCTCCTTCCTGGATGTGACAACTCCTCCCCAATACATGCCAATGCTTTACTTTTACAATACAATACAAATTGAAAACCAAGAATCAAAGTTAGCCCTGCTCAAGGAATCCTTACAGGAAACTCTCTCAGCGTACTACCCAATTGCAGGCAGGTTCAAAGGTCGACTCTCCGTTGACTGCAACGACGAAGGAGTGCCATTGCTAATCACAAAACTCAAATGCCATCTCTCAAACTTTCTCAAAAACCCAATCACACCAAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCAGAGCATGATCCCATCATGGCCATTCAAATCAACTGCTTCCAATGCGGCGGTATCGCAATTGCAATCTGCCTCTCCCACAAATTCGGCGACATGCCCACTCTCTTCAACTTCGTCAACCACTGGGCCGCCATCACCGCCCACCACCAAGATCGGAACAAGCCACTACGTTCTCCGCCCTTACTCGACGCCGGAGTTTCGGTTTTTCCTCAAGGAAACCTTCCGGTTTACGGCGAAAAGCCCTACTACGCTCTCCAGAAAACAGTTTGCAAGAGATTCGTGTTCGAAGCTTCCAAGATCGAAGCCCTGAAAGCCATGGCTGGACCAATTCAACCGACAAGGTTTCAAGCGGTGGCAGCACTGATTTATAAGTGTGCGGTTTCTGCACTAAGCCCTAACTGCCCGTTGTTAACCTCCATTTCCGTGAATCTCCGGAAGAGGGTCGATCCTCCTATTCCTTGCAACACCTTAGGGAACATGTTTTCGTTCTTCATTTTAATGATCTCTCAGAGAGATCAGCTAGCGGAGTTGGTAAGCAAGATGAAAGAAGGGATGATTCGAAGTGAGATGGAGTGGAAGAAGCATGGAGGAAAGTACAGGGACTTGAATTTCATAGCTGAGACACTGAAACGAGCGGCGGAGGCTCCGTCGTTGGAGGCTATGAAGTTTCCGATGATAGGAGTGACTAGTTTGTGCGGGCTTTCAATGTACGAGGCGGATTTTGGGTGGGGGAAACCGGCGTGGATAGCATCCGTTATTAGGAATTTTCAGAACGGTGTGATATTAATGGACGCGAGAGATGGAAAAGGGATGGAAGTGATTGTGAACATGAAAGAGGAGCACATGGCAATGTTTGAGTGTAACCAGGAACTGCTTCAATATGCCGCTCTTGATCCATCCGTTCAACTCTAA 1296 0.4738 MEMELIHKESMKPSSATPPHLKTYPLSFLDVTTPPQYMPMLYFYNTIQIENQESKLALLKESLQETLSAYYPIAGRFKGRLSVDCNDEGVPLLITKLKCHLSNFLKNPITPNLLPLFPDNLAWSDMNNPEHDPIMAIQINCFQCGGIAIAICLSHKFGDMPTLFNFVNHWAAITAHHQDRNKPLRSPPLLDAGVSVFPQGNLPVYGEKPYYALQKTVCKRFVFEASKIEALKAMAGPIQPTRFQAVAALIYKCAVSALSPNCPLLTSISVNLRKRVDPPIPCNTLGNMFSFFILMISQRDQLAELVSKMKEGMIRSEMEWKKHGGKYRDLNFIAETLKRAAEAPSLEAMKFPMIGVTSLCGLSMYEADFGWGKPAWIASVIRNFQNGVILMDARDGKGMEVIVNMKEEHMAMFECNQELLQYAALDPSVQL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63838g00001 431 Pfam Transferase family 2 419 - -
Stsc63838g00001 431 Gene3D - 214 423 IPR023213 -
Stsc63838g00001 431 PANTHER F21J9.9 4 423 - -
Stsc63838g00001 431 Coils Coil 49 69 - -
Stsc63838g00001 431 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63838g00001 Stsc-Chr63838 544 1839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63838g00001 1 414 Monolignol Biosynthesis Gene Families AT5G48930 22.297 2.86e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63838g00001 - - adu:107481923 675.241