Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63565g00003 ATGGTTGATCCACAAAGAATTAGAGCACACAATACCATTTATGCTGGTAAGTTATTGGATATCTTCCATGACTTGATCAAACAAAGGAAGATGTTGATAGAAGAAACTGGTTCTGACACCAATAAAGACATGTTAGAAGCTCTTCTTAACATGTCTCAAGGGAATAGCAAAGAGAAGGACAAAATAAATATTGAACATTTAATGCTGACCTTATTTGTTGCTGGAACTGATACAGTCACATCTACATTAGAATGGGCAATGACTGAATTACTCAGCAATCCAAACATTATGACAAAGGCTAAAAAGGAGCTTGAAGAAACCATTGGAAAGGGAAACCCAGTTGAAGAATCAGACACAGCAAGATTACCATATTTACAAGCAATATTGAAAGAGACATTTCGTTTGCACCCTTCAGTGCCATTTTTGCTCCCAAGAAAAGCAGACAGTGATGTAGAAATCAATGGCTATACCATACCAAAGGGTTCACAGTTGCCAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTGTGGAAGAATGACACAAATTTATTCTCACCAGAGAGGTTCTTGGGATTAGAAACTGATGTTAGAGGGAGGCATTTTGAGTTGTTACCATTTGGTGGTGGCAGAAGAATATGTCCTGGTTTAACATATGCTATGAGGATTTTGTTCTTGATGTTAGGTTCATTGGTTAATTGCTTTGATTGGAAGCTTGAAAATGATATGAAAGCTGAGGATATTGATAAGGAAGAAAAATTTGGATTAACATTAAGAAAGGCTAAACCCCTTAGAGCCATTCCAATCAAAGTAAATAGCTAA 822 0.3637 MVDPQRIRAHNTIYAGKLLDIFHDLIKQRKMLIEETGSDTNKDMLEALLNMSQGNSKEKDKINIEHLMLTLFVAGTDTVTSTLEWAMTELLSNPNIMTKAKKELEETIGKGNPVEESDTARLPYLQAILKETFRLHPSVPFLLPRKADSDVEINGYTIPKGSQLPINVYAIGRDSNVWKNDTNLFSPERFLGLETDVRGRHFELLPFGGGRRICPGLTYAMRILFLMLGSLVNCFDWKLENDMKAEDIDKEEKFGLTLRKAKPLRAIPIKVNS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63565g00003 273 PRINTS E-class P450 group I signature 126 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS E-class P450 group I signature 214 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS E-class P450 group I signature 63 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS E-class P450 group I signature 204 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS E-class P450 group I signature 83 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS P450 superfamily signature 74 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS P450 superfamily signature 205 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 270 - -
Stsc63565g00003 273 SUPERFAMILY Cytochrome P450 14 268 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 FunFam Geraniol 8-hydroxylase 15 267 - -
Stsc63565g00003 273 Gene3D Cytochrome P450 2 270 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc63565g00003 273 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 207 216 IPR017972 GO:0005506|GO:0016705
Stsc63565g00003 273 Pfam Cytochrome P450 18 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63565g00003 Stsc-Chr63565 3164 4076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63565g00003 15 270 Cytochrome P450 AT1G33720 51.724 7.80e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63565g00003 - - ahf:112735734 385.571