Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63386g00002 ATGAGAAGCCTTGTGTCATTTTTTGTGTCTTCTCTGTTTGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATGAACTCATCAGAGATGGTGACAAGTTAGTTTCAGCAAGAGGGACCTTTGAACTGGGATTCTTTAGCCCTGCTAACTCTAGAAACCGATATTTGGGAATATGGTATGTGGCCTCACCTAGAACTCCTATATGGGTAGCAAATAGAGAAGCTCCAATTAGAGATGGTTCAGGAATTCTCAGGATCACTGAGGGGGGTATCCTTAACCTTACTGACATCACATGTAATGTTGTTTGGTCTTCAAATGCATCTGCAACTGCAGAAAATGCATTTGCACAACTTCTGGACTCAGGGAATCTTGTGTTGCGAGACCCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTGTGACACATATATGCCCGGCATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAAACATTCATAACATCTTGGAAGAATGGAGATGACCCTGCCCCTGGTAAGTACTCAATTTATCTTGATACTCATGGTTGGCCACAGGTGTTTATCAGAAAAGGAATCACTGCAGTGTCACGATTTGGATCGTGGAATGGTCTTGGGTTGACAGGAGATCCAGGGAGGCCAGAAGGATCATTGGTCTTTGAATTCACATACAGTGAAAGTGAGGTTTATGTGGGTTACCAACTCAAGAACAGTTCTGCTTTTTCAAGAGATGTACTGCATCCATCAGGCGACATGCAGCGACTCATATGGATTAATAGGATTCAGAATTGGGCAATCGCCTCAACATCTCTGTCAAATCAGTGCCAAAATTATGCATGGTGTGGTGCTTATGGCGTCTGCAATGCCAGTAACTTTCCGGTGTGTGAATGCTTGACAGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGAAACTGGTTTACTGGATGCGAACGGAGGACAAACTTGAATTGCCATGATGATGGCTTCTTGAGGTACATAGGAGTTAAATTGCCTAATACGTCCTCTTCATTCTTCAGTGAAACAATGAATCTTCAAGAATGTAGTCAATTGTGCTTAAGCAAATGCTCATGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGCTGATCTTGTGGATATAGTCGAATATAGTAAGGGCGGTCAAGACCTTTATGTAAGGGTAGCTGCTTCAGATATTGGTGGTGTAGAGAAAATGGGGAGATCCAACAAAAAGAAAAAACTAGCGGCTATCGGAGTTGGAAGTGGGGTTTTATTCATGATTATCATCCTCTTTCTGGTACGCTTAACCTATAAACAAAGGGACAGCAGAATAAGGAGAGAGAAATTTTATGGCCGGGATTTCAGATATGGACAAAGAAAGGAAGATGTGGACTTGCCAACATTTGATTTCCAAACAATAGCTAATGCAACAGGCAACTTTTCTATCGAGAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAGATAGCTGTGAAGAGGCTCTCCGTGAATTCTTGCCAAGGACTAAATGAATTGAAAAACGAAGTTAATATAATCATTGCGAAGCTTCAGCACCGTAATCTTGTCAAGCTTTTTGGTTGTTGTCTGGAGGAGGAAGAGAAAATTTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCCAACAAGAAGCAAATTACTAGACTGGCCGACTCGTATGCATATTATTGTTGGCATTGCTCGTGGTCTTCTTTATCTTCATCAAGACTCTAGGATGAGGATTGTTCACAGAGATCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCAGACTTCGGGCTAGCGAAGGCCTTTGGAGGAGATCAAACTGAGGCGAGAACAAAGCGGATAGTTGGGACACATGGTTATATGCCTCCTGAGTATGCAGTGCATGGGAAAATTTCTGTAAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTAGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGATCCTTATCATAACCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGAAGAAACACTTGCAACTGATTGATGATTCATTAAGCAACACCGTTGATGCAACTGAAATAATGAGATGCATTCATATTGCACTATTATGCGTGCAACAAAGTCCGGAAGAGAGGCCAGACATGTTATCGGTGGTTGTAATGTTAACTAGTGATAGCAACTTGCCGAAGCCAAAACAGCCTGGATTTTATGTGGATAGGA 2368 0.4139 MRSLVSFFVSSLFASFLSSFSALDILTTHELIRDGDKLVSARGTFELGFFSPANSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITEGGILNLTDITCNVVWSSNASATAENAFAQLLDSGNLVLRDPNGRTTESYLWQSFDYPCDTYMPGMKIGKNLVTGLETFITSWKNGDDPAPGKYSIYLDTHGWPQVFIRKGITAVSRFGSWNGLGLTGDPGRPEGSLVFEFTYSESEVYVGYQLKNSSAFSRDVLHPSGDMQRLIWINRIQNWAIASTSLSNQCQNYAWCGAYGVCNASNFPVCECLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLRYIGVKLPNTSSSFFSETMNLQECSQLCLSKCSCTAYANLYVDGSGCLLWFADLVDIVEYSKGGQDLYVRVAASDIGGVEKMGRSNKKKKLAAIGVGSGVLFMIIILFLVRLTYKQRDSRIRREKFYGRDFRYGQRKEDVDLPTFDFQTIANATGNFSIENKVGEGGFGPVYKGTLIDGQEIAVKRLSVNSCQGLNELKNEVNIIIAKLQHRNLVKLFGCCLEEEEKILVYEYVPNKSLDSFIFDPTRSKLLDWPTRMHIIVGIARGLLYLHQDSRMRIVHRDLKASNILLDANMNPKISDFGLAKAFGGDQTEARTKRIVGTHGYMPPEYAVHGKISVKSDVFSFGVLALEILSGKKNRDFSDPYHNLNLLGHSWRLWVEKKHLQLIDDSLSNTVDATEIMRCIHIALLCVQQSPEERPDMLSVVVMLTSDSNLPKPKQPGFYVDR 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63386g00002 789 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Stsc63386g00002 789 PIRSF SRK 1 789 IPR024171 GO:0004674
Stsc63386g00002 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Stsc63386g00002 789 SMART serkin_6 499 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc63386g00002 789 SMART blect_4 29 149 IPR001480 -
Stsc63386g00002 789 Gene3D - 19 146 IPR036426 -
Stsc63386g00002 789 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 762 - -
Stsc63386g00002 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 575 - -
Stsc63386g00002 789 CDD PAN_AP_plant 332 414 - -
Stsc63386g00002 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Stsc63386g00002 789 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Stsc63386g00002 789 Pfam D-mannose binding lectin 70 175 IPR001480 -
Stsc63386g00002 789 ProSiteProfiles Protein kinase domain profile. 499 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc63386g00002 789 CDD STKc_IRAK 505 772 - -
Stsc63386g00002 789 Pfam PAN-like domain 336 399 IPR003609 -
Stsc63386g00002 789 Pfam Protein tyrosine and serine/threonine kinase 500 769 IPR001245 GO:0004672|GO:0006468
Stsc63386g00002 789 CDD B_lectin 30 149 IPR001480 -
Stsc63386g00002 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Stsc63386g00002 789 SMART ntp_6 336 413 IPR003609 -
Stsc63386g00002 789 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Stsc63386g00002 789 ProSiteProfiles PAN/Apple domain profile. 336 414 IPR003609 -
Stsc63386g00002 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Stsc63386g00002 789 SUPERFAMILY Protein kinase-like (PK-like) 484 771 IPR011009 -
Stsc63386g00002 789 Gene3D Transferase(Phosphotransferase) domain 1 576 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63386g00002 Stsc-Chr63386 1992 5438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63386g00002 476 787 Receptor kinase-like Gene Family AT4G23140 57.367 2.14e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc63386g00002 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63386g00002 - - ahf:112707324 1369.37