Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63368g00001 ATGGATCTGCAGAAATTGAATCTTGATTATACAAATGAAGCCAAGGACTCTTTCGTAAGGGACCAAAACTATGCACGGATTGAATCTTTATTGAGATCCCAATCAAAAGAAGTTCAAATAATTGGAGTTTGGGGTATGGGCGGTATAGGTAAAACAACCATTGCTGCAACTATATTTGAAGAATTCTCTATCAAATATGAAATCAGATGTTTCTTGGCAAATGTAAGAGAAGAATTATCAAGGCATGGATTCGAATACATATTCAATAAACTTCTTTCTGTGTTACTACAAGAAGATATTCATATTGATACTCCCACAACAATATCATCTACTATTATGAGTAGATTGAGGCACAAGAAAGCTCTAATTGTTCTAGATGATGTGAATAGTTCTGATCTTCTAGATAATTTGCTCCGAGTTGGACATGATTATCTAGGAGTTGGTAGCAGAGTTATTGTGACAACTCGAGATAAGCATGTCCTTACAAGTAGAGCAGTTGACCAAATTTTTGAGGTCAAGGAAATGAACTATCATAACTCCCTTAAACTCTTTAGCTTGAATGCCTTTAACAAAATTCATCCACCTGAAAATGGATTCCAGGAGCTATCAAAGAGAGCAGTTGCTTATGCCAAAGGCATCCCTTTAGCTCTAAAGGTTTTGGGATCATTTCTTAGTTCCAAAAGTGAAAATGAATGGGAGAGTATACTAACAAAATTGAAAAGAACTCCTAATGCAAATGTTCACAAGGTGTTGAGGCTGAGCTATGATGAATTGGATGATGCAGAAAAGAATATATTTCTAGACATTGCATGTTTCTTCAAAGGGCAAGAAAGAGACAAAGTAATAATGATACTGAATGCCTGTGGTTTCCATGCAAATACAGGGATAAGAAACCTTTTAAACAAGGCTCTAATAACAATAACCCAAACTAAGAGGATACAAATGCATGACTTGATACAAGAAATGGGTCAAGAAATTGTTTTTGAAGAGTCTGTTAAAATTCCTAAAGGACAGACCAGATTGTGGAATCCTGATGAAGTTTGCGACGTACTGAAGAATGATAAAGGGACTGATGCAATTGAAAGCATATTCTTGGACATGACTCAAACCACAGATTTACATATAAGCTCCAATGCATTCAGAAAGATGCCAAATCTAAGGTTACTTGCCTTTGCTGATGGCACTGGTCATGGGGGAAAGATAATTAACAATAGTTTGTATCTTCCATCAAATCTTGAATTACCAGATAGCTTGAGATATATTCAGTGGGATGGATATCCATTGAAATCTTTACCATCCATTTGTTGGCCTAATAAGTTGGTTGAGATTTCCATGCCATACAGCAATGTCGAAAAACTTTGGGACGGAGCACAGAATCTACCAAGTTTAGAGATAATTGACCTTCGCGGTTCCAAACGCTTGATAGAGTGTCCGAATTTCTCAGCCACCCCAAATTTGAAAGAAGTATGGCTCAATTACTGTGAAAGCTTGCCCCATGTTCACCCTTCTATTTTCTATCTTGAGAAGCTTGAATTTTTAGCTGTGTATGGATGCAAAGAACTCACGAGCTTATGCAGTAGCAATTTTTCACCCTCTCTTCATACAGTGGTTGCCTATGATTGCCCTAATCTGCAAGAGTTCTCGATCCCAATATTAGCTGATCATTCTGAAATCCATCTGCACCTGAGGTCAACGGCTTTGAAAACCATACCATCATCAATATTCCATCTTAAGGATCTTCAACACTTCTCCTTTCCAATTAGTGAGAGCCTTATGGATCTTCCTCTAAATTTTGCCTTTCAAATCACACTTTCTGACCCTATTGAGCATAAATATGACACTTCAAGCACCTTACATAGAGTACTACCTAGTCCTGTTTTTCAATCTGTAGTTCGTCTAGTCTTTGATAATTGTTGTAGCTTAACCGAAATCCCAGATAGCATCTCTTTGTTATCATCATTACAGCACTTGAATATTCATAGTTGCACTAATGTCATAACCTTGCCAGAAAGCCTTAAGTGCCTTCCACAGCTTGAAGTTCTGAACATTTTTCAATGTCACATGCTTGAACTTATACCAGTGCTTCCACCTTCCCTTAAACGCCTTAGGGTCTGGGATTGCGATCTTCTAAAGACAGTGTTGAGTACAATAAGTGAACCACCCAGAAAAGATGAGGCTACATTTTTGTTCCTCAACTGCAATAATTTGGATGAAGACTCGCATGCTATCATTTTGAAAGATGTTATTCTTAGGACAGAACATGTGGTAGCATCACCATCATCCGGAGAAGAATTTGAAAACCAAGAAGAAGGATTCTTTGATTGTGATGCAAAATTTGGTGAGATTTGTTATTTGTTGCCGGTTAGAGGCAGCAATATTCATGACTTGTTTGATGTCCACTCTGCTGAAGCTTATTCGTTTAGTGTTGAACTGCCTCAAGATTCCAATCTAGTTGGTTTCCTCTTCTTCATTGTTCTTTCTCAAGAACAATGGTGTGCCATTGAAGAACAAATAGGGTACGATATCAGAGAGATACTAGGCTTTGGTTGTGAATGCTACTTGGAAACAAGTTGGGGTGAAAAGGTCCATGCAGAGAGCTTGTCCTTGTTACAATGGCACTGGGATCAACTCTACCATAATGTTGATATTACATCAGATCATGCGTTATTATGGTATGATGAGAAATGTTGCAAGAAGATAATGGAACCAGTTAGAGGGACAGAAGGAAAAGGCATCAATGATGAGAAGGGGTCCACTGGCAATAATAATGCAAATCTTACTCTTGAATTCTTTGCTGGAGTGGTGAATAAATTGGACGCAGTGATACAAGAGTGTGGCATTCGCTGGATATATCAGACTGTGTAG 2865 0.3798 MDLQKLNLDYTNEAKDSFVRDQNYARIESLLRSQSKEVQIIGVWGMGGIGKTTIAATIFEEFSIKYEIRCFLANVREELSRHGFEYIFNKLLSVLLQEDIHIDTPTTISSTIMSRLRHKKALIVLDDVNSSDLLDNLLRVGHDYLGVGSRVIVTTRDKHVLTSRAVDQIFEVKEMNYHNSLKLFSLNAFNKIHPPENGFQELSKRAVAYAKGIPLALKVLGSFLSSKSENEWESILTKLKRTPNANVHKVLRLSYDELDDAEKNIFLDIACFFKGQERDKVIMILNACGFHANTGIRNLLNKALITITQTKRIQMHDLIQEMGQEIVFEESVKIPKGQTRLWNPDEVCDVLKNDKGTDAIESIFLDMTQTTDLHISSNAFRKMPNLRLLAFADGTGHGGKIINNSLYLPSNLELPDSLRYIQWDGYPLKSLPSICWPNKLVEISMPYSNVEKLWDGAQNLPSLEIIDLRGSKRLIECPNFSATPNLKEVWLNYCESLPHVHPSIFYLEKLEFLAVYGCKELTSLCSSNFSPSLHTVVAYDCPNLQEFSIPILADHSEIHLHLRSTALKTIPSSIFHLKDLQHFSFPISESLMDLPLNFAFQITLSDPIEHKYDTSSTLHRVLPSPVFQSVVRLVFDNCCSLTEIPDSISLLSSLQHLNIHSCTNVITLPESLKCLPQLEVLNIFQCHMLELIPVLPPSLKRLRVWDCDLLKTVLSTISEPPRKDEATFLFLNCNNLDEDSHAIILKDVILRTEHVVASPSSGEEFENQEEGFFDCDAKFGEICYLLPVRGSNIHDLFDVHSAEAYSFSVELPQDSNLVGFLFFIVLSQEQWCAIEEQIGYDIREILGFGCECYLETSWGEKVHAESLSLLQWHWDQLYHNVDITSDHALLWYDEKCCKKIMEPVRGTEGKGINDEKGSTGNNNANLTLEFFAGVVNKLDAVIQECGIRWIYQTV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63368g00001 954 PRINTS Disease resistance protein signature 40 55 - -
Stsc63368g00001 954 PRINTS Disease resistance protein signature 458 474 - -
Stsc63368g00001 954 PRINTS Disease resistance protein signature 210 224 - -
Stsc63368g00001 954 PRINTS Disease resistance protein signature 115 129 - -
Stsc63368g00001 954 FunFam Disease resistance protein (TIR-NBS-LRR class) 176 259 - -
Stsc63368g00001 954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 596 IPR044974 GO:0006952
Stsc63368g00001 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 269 IPR027417 -
Stsc63368g00001 954 Gene3D - 4 169 IPR027417 -
Stsc63368g00001 954 Pfam Leucine Rich Repeat 439 458 IPR011713 -
Stsc63368g00001 954 Gene3D - 174 259 IPR042197 -
Stsc63368g00001 954 SUPERFAMILY "Winged helix" DNA-binding domain 247 352 IPR036390 -
Stsc63368g00001 954 Gene3D Ribonuclease Inhibitor 617 747 IPR032675 -
Stsc63368g00001 954 Pfam NB-ARC domain 27 259 IPR002182 GO:0043531
Stsc63368g00001 954 Gene3D Ribonuclease Inhibitor 281 599 IPR032675 -
Stsc63368g00001 954 SUPERFAMILY L domain-like 364 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63368g00001 Stsc-Chr63368 261 5164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63368g00001 21 681 WRKY Transcription Factor Family AT4G12020 33.979 2.66e-88 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63368g00001 - - adu:107464293 1162.9