Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63302g00001 ATGCAGTTATATCATCATCCATTTGATTTAGATAGTCTGAAGGTTAGACTTGCATTGGAGGAGAAAGCTGTCGATTATACGTCTCACCATGTTAATCCAATTACTGGCAAGAACTTGGATTCCTCATTCTTCAAGATGAATCCGAGCGGAAGACTACCCGTTTTCCAAAATGGATCTCACATCATATACAAGACTATAGATATAATACAGTACATAGAGAGAATCGCTGTGGTTTCGGCAGGGTCTGAGAATATCAGTACTAGTGGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAAGTTCTTTACACTTTCCCATATACCCGATAAATACCGCATTTACGTTTCCAAATTCATAAGGCGTGTTGTGATTGCCCGTATGTCTGAATCCCCTGAATTAGCAGGCGCTTACCATCGGAAGTTAAGAGAAGCCTATCAAACCGAAGAAAAAATGAAAGACCTGGATGTTGTGAAGAGGAGTGAGGAGCACTTGGTTAGACTTCTTGATGAAGCAGAGCGGCAGCTAGGCGAAACACCATACTTAGCTGGTCAAGACTTCACCATGGCTGATGTGGTGCTTATCCCGGTGCTGGCTCGATTAGTGCTCTTGGATTTAGAGAAAGTGTACATAACCAATAGGCCAAACATCGCCGAATACTGGGTTTTGGTTCAACAGAGGCCTAGTTATAAAAAGGTGATTGGTAAGCATTTTG 727 0.425 MQLYHHPFDLDSLKVRLALEEKAVDYTSHHVNPITGKNLDSSFFKMNPSGRLPVFQNGSHIIYKTIDIIQYIERIAVVSAGSENISTSGREVIEWMQKIQEWDPKFFTLSHIPDKYRIYVSKFIRRVVIARMSESPELAGAYHRKLREAYQTEEKMKDLDVVKRSEEHLVRLLDEAERQLGETPYLAGQDFTMADVVLIPVLARLVLLDLEKVYITNRPNIAEYWVLVQQRPSYKKVIGKHF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63302g00001 242 Gene3D - 114 238 - -
Stsc63302g00001 242 SUPERFAMILY GST C-terminal domain-like 151 240 IPR036282 -
Stsc63302g00001 242 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Stsc63302g00001 242 CDD GST_N_family 1 73 - -
Stsc63302g00001 242 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 242 IPR044617 GO:0004364
Stsc63302g00001 242 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Stsc63302g00001 242 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Stsc63302g00001 242 Gene3D Glutaredoxin 1 75 - -
Stsc63302g00001 242 Coils Coil 159 179 - -
Stsc63302g00001 242 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Stsc63302g00001 242 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 242 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63302g00001 Stsc-Chr63302 4092 5732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63302g00001 1 242 Glutathione S-transferase Gene Family AT1G77290 68.182 3.55e-125 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63302g00001 K22077 - gmx:100792543 426.787