Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc63130g00001 | ATGGCGTCTTCGAGTGGAACATCTTCAGGGTCATCAACTCTTGTGCTTCAGAACTCTGGTTCTGAGGAGGAATTGCAGGCTTTGATGGATCAGAAGAAGAGGAAGAGGATGATATCGAACCGGGAATCAGCGAGGAGATCAAGAATGAGGAAGCAGAAGCACCTTGATGATCTTGTTTCTCAGGTGGCTCAGTTAAGGAAGGAGAATCAGCAGATCCTCACAAGTGTGAACATCACCACTCAGCAATATTTGAGTGTTGAGTCTGAGAATTCTGTTCTTAGGGCTCAGGTTGAGGAGCTTAGTCACAGGTTGGACTCACTCAACGAGATCATTGACTTCTTGAATGCCAATAACACTTCTACCAATGGTGCTGTTTATGGTGGTGGTGGTGCTTCTTTGGGGCCATTATTCATGGAGTCACCAGCTAATAGCTTCTTCAACAACTCTTTGAACATGGCGTTTCTTAACCAACCCATTATGGCCTCTGCTTCTGATATGTTGCAATACTGA | 510 | 0.451 | MASSSGTSSGSSTLVLQNSGSEEELQALMDQKKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVESENSVLRAQVEELSHRLDSLNEIIDFLNANNTSTNGAVYGGGGASLGPLFMESPANSFFNNSLNMAFLNQPIMASASDMLQY | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc63130g00001 | 169 | Coils | Coil | 48 | 75 | - | - | |
Stsc63130g00001 | 169 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 35 | 50 | IPR004827 | GO:0003700|GO:0006355 | |
Stsc63130g00001 | 169 | MobiDBLite | consensus disorder prediction | 26 | 53 | - | - | |
Stsc63130g00001 | 169 | SMART | brlzneu | 28 | 92 | IPR004827 | GO:0003700|GO:0006355 | |
Stsc63130g00001 | 169 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 4 | 165 | - | - | |
Stsc63130g00001 | 169 | CDD | bZIP_plant_GBF1 | 33 | 83 | IPR045314 | GO:0003700|GO:0006355 | |
Stsc63130g00001 | 169 | Gene3D | - | 30 | 85 | - | - | |
Stsc63130g00001 | 169 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Stsc63130g00001 | 169 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 30 | 93 | IPR004827 | GO:0003700|GO:0006355 | |
Stsc63130g00001 | 169 | Pfam | bZIP transcription factor | 32 | 89 | IPR004827 | GO:0003700|GO:0006355 | |
Stsc63130g00001 | 169 | FunFam | BZIP transcription factor | 30 | 82 | - | - | |
Stsc63130g00001 | 169 | Coils | Coil | 90 | 117 | - | - | |
Stsc63130g00001 | 169 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Stsc63130g00001 | 169 | SUPERFAMILY | Leucine zipper domain | 32 | 84 | IPR046347 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc63130g00001 | Stsc-Chr63130 | 3899 | 4408 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc63130g00001 | 26 | 169 | bZIP Transcription Factor Family | AT4G34590 | 58.219 | 3.13e-49 | 154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Stsc63130g00001 | bZIP_1 | 5.7e-11 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc63130g00001 | K25786 | - | gmx:100101862 | 219.164 |