Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63130g00001 ATGGCGTCTTCGAGTGGAACATCTTCAGGGTCATCAACTCTTGTGCTTCAGAACTCTGGTTCTGAGGAGGAATTGCAGGCTTTGATGGATCAGAAGAAGAGGAAGAGGATGATATCGAACCGGGAATCAGCGAGGAGATCAAGAATGAGGAAGCAGAAGCACCTTGATGATCTTGTTTCTCAGGTGGCTCAGTTAAGGAAGGAGAATCAGCAGATCCTCACAAGTGTGAACATCACCACTCAGCAATATTTGAGTGTTGAGTCTGAGAATTCTGTTCTTAGGGCTCAGGTTGAGGAGCTTAGTCACAGGTTGGACTCACTCAACGAGATCATTGACTTCTTGAATGCCAATAACACTTCTACCAATGGTGCTGTTTATGGTGGTGGTGGTGCTTCTTTGGGGCCATTATTCATGGAGTCACCAGCTAATAGCTTCTTCAACAACTCTTTGAACATGGCGTTTCTTAACCAACCCATTATGGCCTCTGCTTCTGATATGTTGCAATACTGA 510 0.451 MASSSGTSSGSSTLVLQNSGSEEELQALMDQKKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVESENSVLRAQVEELSHRLDSLNEIIDFLNANNTSTNGAVYGGGGASLGPLFMESPANSFFNNSLNMAFLNQPIMASASDMLQY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63130g00001 169 Coils Coil 48 75 - -
Stsc63130g00001 169 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Stsc63130g00001 169 MobiDBLite consensus disorder prediction 26 53 - -
Stsc63130g00001 169 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Stsc63130g00001 169 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 165 - -
Stsc63130g00001 169 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Stsc63130g00001 169 Gene3D - 30 85 - -
Stsc63130g00001 169 MobiDBLite consensus disorder prediction 1 53 - -
Stsc63130g00001 169 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Stsc63130g00001 169 Pfam bZIP transcription factor 32 89 IPR004827 GO:0003700|GO:0006355
Stsc63130g00001 169 FunFam BZIP transcription factor 30 82 - -
Stsc63130g00001 169 Coils Coil 90 117 - -
Stsc63130g00001 169 MobiDBLite consensus disorder prediction 1 25 - -
Stsc63130g00001 169 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63130g00001 Stsc-Chr63130 3899 4408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63130g00001 26 169 bZIP Transcription Factor Family AT4G34590 58.219 3.13e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc63130g00001 bZIP_1 5.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63130g00001 K25786 - gmx:100101862 219.164