Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc63028g00001 ATGGGTGCGTGGTTGAGAAATGCAAAGCCATATCTGCTTCTTGTGGCGGTGCAATTCGGGTCAGCCGGAATGTTCATATTTGCCATGGATGCAATCCACAAAGGAATGAGTCATTACGTTTTCATTGTCTACCGTAACGCCATCGCCTCCGTTACTCTCGCTCCCTTCGCTTTTCTTCTTGAAAGGAAGGTTAGGCCAAAGATGAGTCTGCGGGTATTTCTTGAGATTATGGCGTTGGCTTTCTTTGAGATCATACTTGATCAATGTTTCGCCCTGCTAGGGATGAAATACACATCCGCATCTTTTCTATCTGCCGTCATGAATTCCGCACCTTCCATTACTTTTGTATTGGCAGTCATTCTTCGAATGGAGCGCATGAAGATTAAGGAGGTAGCATGCCAAGCAAAAGTGATTGGTACCGCGGTGACTTTTGGAGGCACCTTAGTTATGGCATTCTACAAAGGTACCGCGGTTACCGTTGTGGGGGCCACCAAGGCGGCCCACCAGGCGGAGAGTGTGAACAGCTCTTCCGGCAGCCACTGGGCGATAGGGACATGTTTTCTTCTCATTGGTTGCATAGGCTTCTCTGCCTTTTATATATTGCAGGCTATAACATTGAGGAAGTACCCAGCAGAGATGTCGCTTGCAACATGGGTCTGCTTCGCCGGAGCACTTCAGAGCTCGCTCGTGGCAGTTTTCGCCGAGCACCACCATCCTCATGCATGGGCTATTGGTTGGGATGTCAGGCTCTTTGCTCCCGCTTATGCGGGAATAGTAACATCAGGGGTGCAATACTATATACAAGGTATGGTTAGCAAAGCAATGGGCCCTGTAATTGTAACTGCCTTCAATCCACTGCGTATGGTCATTGTTACTGCCTTGGCTTGCATCGTTCTCTCTGAGCAACTGTACCTCGGAAGTATAATTGGGGCAGTAGTGGTGGTTGCTGGTCTCTACGCAGTGGTGTGGGGAAAATATAAAGAGCAGAAAGCAAAGGAGAATTCTCATCGCCAACAACATCTACCTGTCATGGCTCTCACAAATAATGACACTAATAGCAAACCCCAATTTTTAGTCATTCATCCTGATCAACAAATATCAACCACAGAAAGTCAGACCAATTAA 1125 0.4738 MGAWLRNAKPYLLLVAVQFGSAGMFIFAMDAIHKGMSHYVFIVYRNAIASVTLAPFAFLLERKVRPKMSLRVFLEIMALAFFEIILDQCFALLGMKYTSASFLSAVMNSAPSITFVLAVILRMERMKIKEVACQAKVIGTAVTFGGTLVMAFYKGTAVTVVGATKAAHQAESVNSSSGSHWAIGTCFLLIGCIGFSAFYILQAITLRKYPAEMSLATWVCFAGALQSSLVAVFAEHHHPHAWAIGWDVRLFAPAYAGIVTSGVQYYIQGMVSKAMGPVIVTAFNPLRMVIVTALACIVLSEQLYLGSIIGAVVVVAGLYAVVWGKYKEQKAKENSHRQQHLPVMALTNNDTNSKPQFLVIHPDQQISTTESQTN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc63028g00001 374 PANTHER WAT1-RELATED PROTEIN 9 334 IPR030184 GO:0016020|GO:0022857
Stsc63028g00001 374 Pfam EamA-like transporter family 10 149 IPR000620 GO:0016020
Stsc63028g00001 374 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
Stsc63028g00001 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 327 - -
Stsc63028g00001 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc63028g00001 Stsc-Chr63028 2074 4667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc63028g00001 5 343 Nodulin-like Gene Family AT2G39510 43.363 7.38e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc63028g00001 - - gmx:102665912 533.872