Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62982g00001 ATGCTGGTGCCTCCATGGCTTGAACCACTGCTACGAACATCGTTCTTCAGCGTGTGCAGGATCCATGGCGACGCAGCGAGGAGCGAGTGTAACATGTTTTGCCTGGATTGCGATGACGGCGATTCCTTTTGCTTCTACTGCCGCTCATCTAGGCACAAGGATCATCAAGTCATTCAGATAAGGCGATCTTCATATCACGATGTAGTTCGAGTGGCGGAGATTGAGAAAGTGTTGGACATAAGTGGAGTGCAGACATATGTGATTAACAGTGCGAGAGTGCTGTTTCTGAATGTGAGGCCTCAGCCAAAATCTGGGAAAGGAGGAGTGCCTCACATTTGTGAGATGTGTGGTAGAACCCTGTTGGACCCATTTAGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGGGATGCAAGTTTTGCTTTGGATGGGAACAATGAAGCATCGATAATGGCTAATAGGTCAGAATTGCGTGAAGGCTCAACACAAGACATGTATCCGGCCACGCCTCCTCCACCTCCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCTCCTTTTGCCTCCTAA 588 0.4745 MLVPPWLEPLLRTSFFSVCRIHGDAARSECNMFCLDCDDGDSFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIEKVLDISGVQTYVINSARVLFLNVRPQPKSGKGGVPHICEMCGRTLLDPFRFCSLGCKLERIKKNGDASFALDGNNEASIMANRSELREGSTQDMYPATPPPPPSNARRRKGIPHRAPFAS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62982g00001 195 MobiDBLite consensus disorder prediction 159 195 - -
Stsc62982g00001 195 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 193 - -
Stsc62982g00001 195 Pfam PLATZ transcription factor 61 133 IPR006734 -
Stsc62982g00001 195 SUPERFAMILY B-box zinc-binding domain 14 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62982g00001 Stsc-Chr62982 2070 4068 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc62982g00001 PLATZ 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62982g00001 - - gmx:100809455 325.479