Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62890g00001 ATGGTTCTCCTGAAATCATCATCATCATCATCTCTAGTGTTTAAAGTGAGGAGGAACCAACCGGAGCTTGTGGCACCTGCTAGCCCCACTCCCCATGAACTTTTGCTTCTATCTAACCTTGATGACCAAATGGCTGTTCGCTGTCACCTTGAATCGGTGCAATTCTTTCCTTACAACCCTTCAATAACGGCATGGGAAGACTTCATCCATTTCTTTAAGGAAGCATTGTCAAAAACACTTGTGTTTTATTATCCATTTGCTGGCAGAATTAGGGAAGGTGCTAAGGGCAAACTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCACCCAAGCTGAAGCTGATGTCACACTTGACCAGTTTGGCAGTGATCTTATGTCTCCGTTTCCTTGCTTTGATGAGCTTTTTTACAATGTTTGTGCATCTGATCAAATTATTAACGCTCCTCTCCTAACTTTTCAGATGACACATCTCAAATGTGGTGGATTCATATCTGCTATCCGAATGAACCACACAATGTGTGATGGGAGTGGAATTGGGCAGTTCACAAAGGCCATAATAGAAATAGCACAGGGCGCAGCAAAGCCTTCCATCATGCCGGTGTGGTGTAGGGAGCTTCTTTGTGAGAGAGACCCACCAAGAGTCACATGCATCCACCATGAATATGACCAACTACCACTTGACAACAAAAGCGTCTTCAAACCCTACCAAGCTTCCTTCTTCTTTGGCCCCAAAGAGATCCATGCATTGCGCCGCCATCTCCCCAGCCACCTTGCCGAATCTTCCACCACCTTTGACATCCTCACTGCATGCTTGTGGCGTTGTCGCACAGTTGCATTGCAATGGGAAAACCCTAATCAAGAGGTTCGCTTAATATTCTCTGTGAATGCACGTCATGGACCCTGCAGGTTGGTGATAAAACTTAATCTCTCTACTCTTTAA 942 0.4512 MVLLKSSSSSSLVFKVRRNQPELVAPASPTPHELLLLSNLDDQMAVRCHLESVQFFPYNPSITAWEDFIHFFKEALSKTLVFYYPFAGRIREGAKGKLMVDCTGEGVLFTQAEADVTLDQFGSDLMSPFPCFDELFYNVCASDQIINAPLLTFQMTHLKCGGFISAIRMNHTMCDGSGIGQFTKAIIEIAQGAAKPSIMPVWCRELLCERDPPRVTCIHHEYDQLPLDNKSVFKPYQASFFFGPKEIHALRRHLPSHLAESSTTFDILTACLWRCRTVALQWENPNQEVRLIFSVNARHGPCRLVIKLNLSTL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62890g00001 313 PANTHER ACYL TRANSFERASE 4 14 299 - -
Stsc62890g00001 313 Pfam Transferase family 15 299 - -
Stsc62890g00001 313 Gene3D - 235 304 IPR023213 -
Stsc62890g00001 313 Gene3D - 13 224 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62890g00001 Stsc-Chr62890 1524 2897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62890g00001 15 298 Monolignol Biosynthesis Gene Families AT5G48930 32.653 9.09e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62890g00001 K19861 - gmx:100795237 412.92