Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62868g00001 ATGACGGATTGGCATTCAACTCCGTTGCATCTGAATTCCATGCACGAGGAATCTCAATTGGAAGAGCAAATGGAGGATCTGAATTCCATTGATCAGGTTGGGCAATTGGATGATCAAACAGAGGTTAATGTTTTTCAATTGGATGAAGAGCATGTCCCCAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTGGTGAATTCTACAACGGGTATGCTAAACGAGCTGGATTTTCCTCCAAAATCAGAAATTCACAAAGAAATAAAAAGACCGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAGAGGGAAAAAGTAGATCTGACATTCCTGAGGCGGAAAAAACGAACCCCATGTCCCCGGCAAATTGTCCGGCAAGGATGTTCATTCATATCGATAAGTTGACTCAGCGTTATGTTATTTCCAAAGTTGTGTTGGAGCATTCACATCCATGCTCTGCCAATCATGCAGAGGATCTACCTCAACACAGGGAACTCAGCATTGAATCATCATGGACATTCCACACTTCTTGGCTGTGCTTTGTTGAGGAACGAAGACATCGATTCATTCAAATGGCTATTTGA 588 0.4218 MTDWHSTPLHLNSMHEESQLEEQMEDLNSIDQVGQLDDQTEVNVFQLDEEHVPKVGMTFKSCTEAGEFYNGYAKRAGFSSKIRNSQRNKKTGAIKNQLFTCKREGKSRSDIPEAEKTNPMSPANCPARMFIHIDKLTQRYVISKVVLEHSHPCSANHAEDLPQHRELSIESSWTFHTSWLCFVEERRHRFIQMAI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62868g00001 195 Pfam FAR1 DNA-binding domain 67 153 IPR004330 -
Stsc62868g00001 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62868g00001 Stsc-Chr62868 1214 2423 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc62868g00001 FAR1 3.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62868g00001 - - adu:110280446 141.739