Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62446g00002 ATGGAAGAATTTGTTCTTGGGAGCATTTTAGATGCCATTGTGAGTCAAGTGATGCTGTTGGTGAGAGGGAAAAGCTTGCAGCTGTTTCATGAAATTCCTGATGAAATCAAAACACTTGCTCTTTATGGTGACCAAATTAAGCTTCAGATGGTCTTATCTGACTTTCTGCTTAATGTTGTCAACCATACACCATCTCCAAATGGCTGGGTTGAAATCAAGATTTCACCTGGCTTGAAGATAATTCAGGACGGCCACGAGTTTATCCACTTGAAATTCAGAGTGAGCCATTCCGGTCAAGGTCTTCCTTCTAACATTCTTCAAGATATGTTTGAAGAGGGGAATCAATGGACTACACAGGAAGGTTTAGGGCTATATATGTCAAGAAAAATGCTTAGTAGGATGAATGGTCATGTTCACTATGTGAGAGAACAAAATAAATGTTACTTCCTCATTGATCTTGAACTTAGAACAAGAAAAGAATGGCAAAGGAATTTGCAAGCTGAGACAAGCATGTTGAGTTAG 522 0.3908 MEEFVLGSILDAIVSQVMLLVRGKSLQLFHEIPDEIKTLALYGDQIKLQMVLSDFLLNVVNHTPSPNGWVEIKISPGLKIIQDGHEFIHLKFRVSHSGQGLPSNILQDMFEEGNQWTTQEGLGLYMSRKMLSRMNGHVHYVREQNKCYFLIDLELRTRKEWQRNLQAETSMLS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62446g00002 173 CDD HATPase_Phy-like 42 155 IPR044767 -
Stsc62446g00002 173 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 145 - -
Stsc62446g00002 173 ProSiteProfiles Histidine kinase domain profile. 1 157 IPR005467 -
Stsc62446g00002 173 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6 153 IPR036890 -
Stsc62446g00002 173 Gene3D - 1 160 IPR036890 -
Stsc62446g00002 173 SMART HKATPase_4 43 157 IPR003594 -
Stsc62446g00002 173 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 153 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62446g00002 Stsc-Chr62446 4352 5578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62446g00002 2 157 Histidine Kinase Gene Family AT4G18130 53.846 1.64e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62446g00002 K12123 - lja:Lj4g3v2295890.1 308.916