Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62446g00001 ATGGGCCGTGCAAAAGCAGAATTGAAGTGTCTCTCAAATTTGAGAGAAAGAAAAGGCAGATTCAAGACAAGAATAAAGGGACTAGAGAATAAATTGAAGAAATTTTCTGACACATGTGAAGGATCCAAAGCATGCTTCATAGTTTATGAAGAAGATAGCAATGCTGCACCGATGATTTGGCCAAAAGATTATGCAAAAGTCAATTCCTTGATTAAAAAATATGAGGCTCACAAGAATGTGAAACCTCATGAGATTTTTGATCTCGAAGATTTCTTTAAGCATAAGAAGACCTCAATTGAAGCCGAAATTTCAAAAGCGCGAAAATGCATCCGCAACTTCAAGTATCCCACTTTTGACTTGAATATCCAGAGCTTAGATTTGGAACAATTGAGGATGTTCATAGGTATATTGGATAACAAGATAGGTGCATGTGATGAAAGAATTGACCTGCTGAAAAGTAATCAAAAAGTTGAAAGTAACTTCAATTTTGGGCACAATAGTAATCAATACAACTTTCTGCTTGATCCAATTCTTTTGGAATTGATGGGAAGTAATCATGAGACTCGTCAAAATTCAAGGCTTCAACTAAATCAAGAGCTTGATCAAGATGAAGATCGGAACTTTCAGTATCAAGTGGGTTCACCTGTGCACAACTCTCCACCAGGTAATTGGATGCAGTTAAACAGCCCTGTGGAGCAGAATTCTATGCAAACTATGTGTCATTCTCCTGGTCCTGCCTCTAGGATCATGAGCCCAACAACTGGTAGCCACTCACCTGAGCAGAATTCTATGCAAACTATCTCCGGGCTGGCTTCGATTTCGCAACCTCAGGTATCGAATACTGCTAAGGCTGAAACTATTGGTAAAGACTTTGGAAGGAGCAATCCCGGCGAGCATATGAAGGAGCCGGTTCACTATGATAATACTAACAAGAAAGATGAAGTTAGTGAGGCTTTGGATTGGGAAACTCAACTTGCAGAGGCTCAGGCTTGGGCTAGTGACTTTGAAGAGTTTGAGAATTTGATGAATCAACAAAATGAGCATTTGGATTTATTATACAGTATATAG 1068 0.3914 MGRAKAELKCLSNLRERKGRFKTRIKGLENKLKKFSDTCEGSKACFIVYEEDSNAAPMIWPKDYAKVNSLIKKYEAHKNVKPHEIFDLEDFFKHKKTSIEAEISKARKCIRNFKYPTFDLNIQSLDLEQLRMFIGILDNKIGACDERIDLLKSNQKVESNFNFGHNSNQYNFLLDPILLELMGSNHETRQNSRLQLNQELDQDEDRNFQYQVGSPVHNSPPGNWMQLNSPVEQNSMQTMCHSPGPASRIMSPTTGSHSPEQNSMQTISGLASISQPQVSNTAKAETIGKDFGRSNPGEHMKEPVHYDNTNKKDEVSEALDWETQLAEAQAWASDFEEFENLMNQQNEHLDLLYSI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62446g00001 355 SUPERFAMILY SRF-like 1 80 IPR036879 GO:0003677|GO:0046983
Stsc62446g00001 355 Coils Coil 11 31 - -
Stsc62446g00001 355 ProSiteProfiles MADS-box domain profile. 1 48 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62446g00001 Stsc-Chr62446 2563 3876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62446g00001 1 141 Type I MADS-box Gene Family AT5G55690 26.027 1.60e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62446g00001 - - adu:107479968 312.768