Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62438g00003 ATGAAGAAGATCATCATCCTCATAATACTAACCTTATTCTTTTGTGTCTTCCCCTTTGCATATGCAGACCTAAAGCTTGGCTTCTACAGCACCAGCTGTCCAGATGCAGAGGCAATTGTTCATGCTGTTGTTCAACAGAATTTCAACGAGGACAGATCCATAACCGCCGCCTTGCTTCGCATGCACTTTCACGATTGTTTTGTTAGAGGTTGTGATGCATCATTGCTAATAGATTCAACTGAGAGCAAGTCACCGGAGAAAGACGCCGGTCCGAACCAAACGGTTCGGGGATTCGAAATCATTGACGAGGCTAAAACTCTCTTGGAAGCAAGTTGCCCTTCAACAGTGTCGTGTGCAGATATCATATCACTGGCAACCAGAGATGCAGTGGCTCTGGCCAGTGGACCAAGGTACAATGTCTCAACGGGAAGAAGGGACGGGCTTGTGTCAAATTCAAAAGAAGTGAAACTTCCCTCGCCAGATATGTCCGTGTCTGAGGCTTTGCAGTTCTTCACTGCAAAGGGGTTTTCACTGTTCGAAATGGTGACACTCTTGGGAGGAGGACATTCCGTTGGAAATGCCCACTGCAGCATGTTTCGGGAGAGGCTTTCGAGCTTTAATGGAGGAAATCTTGATCCCAGCATGGATCCTAATTTGGATGCAAGATTGGTGAAGGTATGTGGATCGTCAAGGCGGCCGGCGAGGAACAATCCGACGGTGTTTTTGGACCAAAAGACGCCATTTGCATTTGATAATCGGTTTTATAACGAAATTCTTGAGAAGAATGGCATACTTCACATCGATCAGCAGTTGGCTATGGACTCATTGTCACGAGACATGGTTTCACGTTTTGCGGATGATGCTGATAGCTTATTTCAAAACTTTGCAAATGCCATGATCAAATTGTCAGCTGTTAATGTTTGGCTTGGGAATGAAGGAGAGATTCGAAAGAACTGTAGGGCTTTTAATAAGAATAATGAATGA 984 0.4502 MKKIIILIILTLFFCVFPFAYADLKLGFYSTSCPDAEAIVHAVVQQNFNEDRSITAALLRMHFHDCFVRGCDASLLIDSTESKSPEKDAGPNQTVRGFEIIDEAKTLLEASCPSTVSCADIISLATRDAVALASGPRYNVSTGRRDGLVSNSKEVKLPSPDMSVSEALQFFTAKGFSLFEMVTLLGGGHSVGNAHCSMFRERLSSFNGGNLDPSMDPNLDARLVKVCGSSRRPARNNPTVFLDQKTPFAFDNRFYNEILEKNGILHIDQQLAMDSLSRDMVSRFADDADSLFQNFANAMIKLSAVNVWLGNEGEIRKNCRAFNKNNE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62438g00003 327 Gene3D Peroxidase, domain 2 158 302 - -
Stsc62438g00003 327 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 Gene3D - 27 323 - -
Stsc62438g00003 327 FunFam Peroxidase 158 302 - -
Stsc62438g00003 327 Pfam Peroxidase 41 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Stsc62438g00003 327 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Stsc62438g00003 327 FunFam Peroxidase 27 168 - -
Stsc62438g00003 327 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 SUPERFAMILY Heme-dependent peroxidases 23 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc62438g00003 327 PANTHER - 6 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62438g00003 Stsc-Chr62438 5259 8002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62438g00003 1 323 Peroxidase AT4G26010 53.870 2.30e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62438g00003 K00430 - egr:104443372 399.823