Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62417g00001 ATGCCTTCAGTGTGTCCTTCACTTGTCTTGTTCGCAGCAAGACTTTCAGGGCTTGCAGTTGCACTCCTTGTCCTTTATTGGGCCCTTGCCTTCAAATCCACCTTTCTCCCTTCTTCTCTTTCCCAACAAGACTTCATTTATGCAGTACTTCATCCTTTGCTGATGGTCATTGGCTTTATTCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGATGGTTGCCTGGGTCTATGGGATTGAAAAAATTAGTGCATTTAGTGCTTCAAGGTGTGGCTCTAGCTTCTGGAATATTTGGAATTTGGACTAGATTTCAGGGAAAGGATGGGATTGTGGCCAATTTCTATAGCCTTCATTCATGGATGGGTTTGATTTGCATTTCCCTCTTTGGAACTCAGGCTTCTAGGGCTATTCACCTTCACATCAACCCCCTTCTCAGCCATAGTTCTCGGCTACGCCGAAGAGCTTGTCACCGAAGGCACATCTTCTTACCTCGAATATTGAGGCTTGGCACCCCATTCGAAGTCCTTTGGACAATCGTTAAGGGACCCGACCTTAACATTAGCGCCGTCTGTGGGGATCTCATACTCGAGGGACAAGAAGCATAG 603 0.461 MPSVCPSLVLFAARLSGLAVALLVLYWALAFKSTFLPSSLSQQDFIYAVLHPLLMVIGFILLSGEAILVHRWLPGSMGLKKLVHLVLQGVALASGIFGIWTRFQGKDGIVANFYSLHSWMGLICISLFGTQASRAIHLHINPLLSHSSRLRRRACHRRHIFLPRILRLGTPFEVLWTIVKGPDLNISAVCGDLILEGQEA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62417g00001 200 PANTHER CYTOCHROME B561-RELATED 6 157 IPR043205 GO:0016491
Stsc62417g00001 200 ProSiteProfiles Cytochrome b561 domain profile. 12 200 IPR006593 -
Stsc62417g00001 200 SMART 561_7 50 175 IPR006593 -
Stsc62417g00001 200 Pfam Eukaryotic cytochrome b561 50 157 IPR006593 -
Stsc62417g00001 200 Gene3D - 2 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62417g00001 Stsc-Chr62417 3231 7867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62417g00001 1 131 Chloroplast and Mitochondria Gene Families AT1G26100 64.925 7.66e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62417g00001 K08360 - gmx:100527512 210.69