Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62378g00001 ATGCCCGAACCCGCTTCAGACTCTCCCAAATCCAAATCCACCATTAAATTCCTCTGCAGCTACGGCGGCAAGATCCTCCCCCGCTACCCCGACGGCAAACTCCGCTACCTCGGTGGCCACACCCGCGTTCTCTCCCTACATCGCAACATCCCTTTTTCTGAGCTCATGCTGAAGCTTGAGGAGCTCTGCGGCACCGCCGTTAGACACCTCCGCTGCCAGTTACCAGCGGAAGATCTCGACGCCTTGGTGTCCATCACCTCCGACGAGGACCTAGCCAATCTAATCGAGGAATACGACCGTGCCGCCACATCTTCCCTGAAGATCAGAGCCTTTCTCTCGCAACCGAAATCTACGAACAAAGTCTCCGTCAATCCGCCGCCCTCTCTACATTCGAGATCGGCGTATTCCTCATCTTCTTCGTCAGCTTCGGCCTCCTCCTCATCATCGTCGCCTTCCTCATCGCCCTATTGTAGCGTTGCTGGTACTAATGGAAGTGGTTACCATGGCTACCATGGTTTCAGTCCTAGACAGAGTTATAAAGAGGCGGAGCCATGCATCCGTCAGATGTGGCCAGCCGCTGGTGGTGGGAAAACAGGTGGAAGAAATATTCCAGTGCGGCGCGACGGTTATGGTGGTCAGGAAAACCCTGGCCACGTGTGTCTTATCTATAACGGCAACCACTGGCAATAG 690 0.5493 MPEPASDSPKSKSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLSLHRNIPFSELMLKLEELCGTAVRHLRCQLPAEDLDALVSITSDEDLANLIEEYDRAATSSLKIRAFLSQPKSTNKVSVNPPPSLHSRSAYSSSSSSASASSSSSSPSSSPYCSVAGTNGSGYHGYHGFSPRQSYKEAEPCIRQMWPAAGGGKTGGRNIPVRRDGYGGQENPGHVCLIYNGNHWQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62378g00001 229 MobiDBLite consensus disorder prediction 116 157 - -
Stsc62378g00001 229 Pfam PB1 domain 31 112 IPR000270 GO:0005515
Stsc62378g00001 229 SMART PB1_new 29 113 IPR000270 GO:0005515
Stsc62378g00001 229 Gene3D - 33 114 - -
Stsc62378g00001 229 SUPERFAMILY CAD & PB1 domains 31 124 - -
Stsc62378g00001 229 CDD PB1_UP2 18 112 - -
Stsc62378g00001 229 PANTHER OS05G0427100 PROTEIN-RELATED 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62378g00001 Stsc-Chr62378 1246 2059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62378g00001 15 205 MAP Kinase Kinase Kinase AT5G57610 36.364 5.45e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62378g00001 - - lang:109349167 233.802