Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62375g00002 ATGGTTCTCCTGAAATCTTCATCAACATCTCTAGTTTTTAAAGTGAGGAGGAACCAACCGGAGCTTGTGGCACCTGCTAGTCCCACTCCCCATGAACTTAAGCTTCTATCTAACCTTGATGACCAAATGGGTCTTCGTATTCACCTTGAATCGGTGCAATTCTTTCCTTACAACCCTTTAATAACGGCTTGGGATGACTTCATCCATTTCTTTAAGGAAGCATTTTCAAAAGCACTTGTGTTTTATTATCCATTTGCTGGGAGAATCAGGGAAGGTGCTAAGGGCAAACTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCACCCAGGCTGAAGCTGATGTCACACTTGACCAGTTTGGCAGTGATCTTATGCCTCCGTTCCCTTGCTTTGATGAGCTTCTTTACAATATTCCTGGTTCTGATCAAATTATTAATGCTCCTCTCCTAACTTTTCAG 459 0.4248 MVLLKSSSTSLVFKVRRNQPELVAPASPTPHELKLLSNLDDQMGLRIHLESVQFFPYNPLITAWDDFIHFFKEAFSKALVFYYPFAGRIREGAKGKLMVDCTGEGVLFTQAEADVTLDQFGSDLMPPFPCFDELLYNIPGSDQIINAPLLTFQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62375g00002 153 PANTHER ACYL TRANSFERASE 4 13 121 - -
Stsc62375g00002 153 Pfam Transferase family 14 153 - -
Stsc62375g00002 153 Gene3D - 13 153 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62375g00002 Stsc-Chr62375 9785 10243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62375g00002 13 153 Monolignol Biosynthesis Gene Families AT5G48930 36.364 1.84e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62375g00002 K19861 - gmx:100795237 199.134