Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62375g00001 ATGGTTCTCTTGAAATCTTCGTCATCATCTCTAGTGTTTAAAGTGAAGAGGAAAAAAACTGAGCTTGTAGCACCTGCTAGCCCCACTCCCCATGAAATTAAGCTTCTATCTAACCTTGATGAACAAGAGGGTCTTCGTTGTCACCTTCCATTGGTGCAATTCTTTCCTTATAACCCTTTAATAACGGCATGGGATGACATCATCCATTTCTTTAAGGAAGCATTGTCAAAAGCACTTGTATTTTATTATCCATTTGCTGGGAGAATCAGGGAAGGTGCTAAGGGCAAACTTATGGTGGATTGCACTGGCGAAGGTGTATTATTCACCCAGGCTGAAGCTGATGTCACACTTGACCAATTTGGCAGTGATCTTATGCCTCCGTTCCCTTGCTTTGATGAGCTTCTTTATAATGTTCCTGGTTCTGATCAAATTATTAACGCTCCTCTCTTAATTATTCAGGTGACACGTCTCAAATGTGGTGGTTTCATATTGGCTACGAGAATGAACCACACCATGTGTGATGTGATTGGACTTGAGCAGTTCACAAAGGCGTTAATAGAAATAGCCTTTGGCGCAGAAAAACCTTCCATCATGCCGGTGTGGTGTAGGGAGCTTCTTTGTGAGAGAGACCCACCAAGAGTCACATGCATCCACCATGAATATGACCAACTACCACTTGATAACAAAAGTGTCTTCAAACCCTACCATTCTTCCTTCTTCTTTGGCCCCAAAGAGATCGATGCGTTGCGCCGCCGTCTCCCCAGTCACCTTGCTGAATCTTCGACCACCTTTGACGTCCTCACTGCATGCTTGTGGCGTTGTCGTACAGCTGCACTGCAATGGGAAAACCTTAATCAAGAGGTTCGCCTATTATCCATTGTGAATGCACGTCTTGGAGCCTCCAGATTCAACCCTCCACTGCCAAAAGGGTTTTATGGCAACGCTATTGTGTTTCCTGCGGCGGTTTCCACGGTGGGAAAGATCTGCGGAAGCCCCTTGAGCTATGCATTGGAGTTGGTGAAAAAGGCAAAGAGCGAAGCAAGTGAAGAGTATTTTCACTCTGTTGTTGACCTATTGGCCATTAATGGAAGGGCTTGCTTTACTAGAACAGGATCCTTTGTGGTGTCAGATCTTTCAAGAACTGGATTTAGAGATGCGGATTATGGGTGGGGCAAGCCTTTGTATTCTGGATTAGCCAAAGCTGGTTTTGGAGACATTCTTGGTGTGAGTTTCTATGTTCCCCATACCAACTCTAAAGGAGAGCATGGTACTGTTGTTCCAATATGTTTGCCTGAAGAAGCCATGGTCAGGTTTGAAGAAGAGCTTAATGAGATACTCAATTTCAAGGATGAAAAAGAAGAATATGTGACTGTTTTAAGGTCCAATATGTAG 1392 0.4411 MVLLKSSSSSLVFKVKRKKTELVAPASPTPHEIKLLSNLDEQEGLRCHLPLVQFFPYNPLITAWDDIIHFFKEALSKALVFYYPFAGRIREGAKGKLMVDCTGEGVLFTQAEADVTLDQFGSDLMPPFPCFDELLYNVPGSDQIINAPLLIIQVTRLKCGGFILATRMNHTMCDVIGLEQFTKALIEIAFGAEKPSIMPVWCRELLCERDPPRVTCIHHEYDQLPLDNKSVFKPYHSSFFFGPKEIDALRRRLPSHLAESSTTFDVLTACLWRCRTAALQWENLNQEVRLLSIVNARLGASRFNPPLPKGFYGNAIVFPAAVSTVGKICGSPLSYALELVKKAKSEASEEYFHSVVDLLAINGRACFTRTGSFVVSDLSRTGFRDADYGWGKPLYSGLAKAGFGDILGVSFYVPHTNSKGEHGTVVPICLPEEAMVRFEEELNEILNFKDEKEEYVTVLRSNM 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62375g00001 463 Gene3D - 234 449 IPR023213 -
Stsc62375g00001 463 PANTHER ACYL TRANSFERASE 4 13 445 - -
Stsc62375g00001 463 Pfam Transferase family 13 443 - -
Stsc62375g00001 463 Gene3D - 12 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62375g00001 Stsc-Chr62375 2923 6043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62375g00001 13 445 Monolignol Biosynthesis Gene Families AT5G48930 30.512 5.34e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62375g00001 K19861 K13610 gmx:100795237 634.409