Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62336g00001 ATGGTTCAAAGGAAGGTACCGAAGAAGGTTGGAATCAAAGGTGACCATGCTAATAACAATAAATCGGAGAAGCGCTTCGCGAACATGAAGCTTTCTTCTTCCTCTTCTTTGTCTTGTCAGAACCAAGATGGGAAAAACAAAGGTACTGATATGAAGAAGAAAATGATGAAGAAACCAATAAGGTCAATCAGTCTTTCTGATCTTGAGGCTCTTCAGTCACCTCCTTCTAGAAGATTCTCATCCCAACCGGGCAAGCCACCGCCACCACAATCTCTTCACCTTCCAAGAACTACTACGACTACTACACCATCAGCATCCCCACAAAAGCATAACTCTCCGGTGAGAACAATTGATGGAAACTCTCCTAATTACATGAAGCCCACAAGCAGTTCCCATGCGAAAAAGGAACTTTTCCCGGTGACCCTAAAGAACGCCACTACTCAACCTAGTACTAATAATTCCAAGAATCTTCAAAGAAAATTCTCTAGTGATTCAAGAGAAGTAGCTACCTCTGTATCCAGCAAAAAACCTGCAAAGAATTTCACAAGATCATCTAGTTTGAGTTTGGTGAGATTGCTAACAAAGACTACAAGCTTCAAAGCTTCTTCTAGAGCTTGTCCGAAGAAATCGACAGCCAGAGCCACTTGTTCTTCTACTTTGAAGGACTCAAAGTTCCCGGCATACCTCATGCTTAATCCCGGGGGCAGCGAGTTGGAGGGAACGTCGGTCGCCAAGGTTTGTCCGTACACTTATTGTTCTCTTAATGGTCAGTGTCACCGGCATGCAGACTTGCCTCCTCTCAAGAATTTTGTGTCAGCGAGGAGGCAACTCCTGAAGACACAGAAGAGCATGATGCTTGATGCATTGAGTCCCAGGAAATCAAAGATGGAGGTGCCTTGTGATACAAGGAATGGCTCTGAAACTGGTGTGGATGGCTTCATTGAGATCTATGCTAAGGAAAAGGAGGCAGAGTCAATCGAATTGCAGAAATTCGATTGTATTAAGGAGAATGAGGATCCAAGAGATTGTGTTCCGAATGAGGGAAATTCAGGAGATGAAGGGAATCAATGTATGTGGTCTCACGAAGAAATAAGCATGGGAAGCTACTTCAGCGATGATAGCTATGATGGGGAAAGCAAAAAGGATACTGAAATGGAAGATTCTGATTGTAGAGCTAATGGAATGGAATGGGGGGAGAAACTGCTCTGTGGATTTGGCCTTGAAGAAGAGGCTGCAGATTCTTCGGTCTTTTCGGACAGCGAAAATGACTCGAAAATTGAGTCTTTGTCTCTGAGTTCTCGCGAAGTTTCGGTTACATGGTTAGATGACATACTTAGCGGCTATTATGATGACATTTTTTCTGAAGAAAGAATGCAAATACCGGAATCGAATGCGAAAGAAAGCCAATCTTTGGAGGAACAAGAAGGAAAGTTTTCTGTTCCCGAAGATGCGAATGAAGCTACTGAGATTCAAGAAAATGGTTACTCATCCAGTGAATTGGATTGTGATCAATCTTTGCTAACACAGTATTCCAAAATGGGAGAAGATAATGGTAATGAAAATGAAAATAGCTATTGTCAAGTTAAGATGGTTCATATGGCTGAAGATGGATCCATGGCTATTGAAGAAAAGGAATTTCTCAAGAAAGATCGAGGCGAAGCGAATGAGTTTGTCCGGAACATAATGAGTGGTGAGGAAGAGCAGGACACAAGCAAGAACTGGAAAATAGTGATTAAGAGAAAAAAGGGTTCGGAAGATGATGATGAGGCTAGGAATTTCAACCCGAGAGAGCCAAATTTCCTGCCATTGGTTCCTGAACCAGAAGCTGAGAAGGTTGATCTTAGGCACCAGATGATGGATGAGAGAAAGAATGCAGAGGAATGGATGGTGGATTCTGCTCTAAGACAAGTCGTAACGAAACTCGCTCCGGCTAGGAAGAAGAAGGTAGCACTGCTTGTTGAAGCCTTTGAAATGGTGATGCCAATTCAAAAATGTGAAGAGTCTCACATGAGAAGCAATTCTTCAGCCTGTGATCCGCATTCAACACATATTCAAGCTTGCGGATGA 2067 0.4286 MVQRKVPKKVGIKGDHANNNKSEKRFANMKLSSSSSLSCQNQDGKNKGTDMKKKMMKKPIRSISLSDLEALQSPPSRRFSSQPGKPPPPQSLHLPRTTTTTTPSASPQKHNSPVRTIDGNSPNYMKPTSSSHAKKELFPVTLKNATTQPSTNNSKNLQRKFSSDSREVATSVSSKKPAKNFTRSSSLSLVRLLTKTTSFKASSRACPKKSTARATCSSTLKDSKFPAYLMLNPGGSELEGTSVAKVCPYTYCSLNGQCHRHADLPPLKNFVSARRQLLKTQKSMMLDALSPRKSKMEVPCDTRNGSETGVDGFIEIYAKEKEAESIELQKFDCIKENEDPRDCVPNEGNSGDEGNQCMWSHEEISMGSYFSDDSYDGESKKDTEMEDSDCRANGMEWGEKLLCGFGLEEEAADSSVFSDSENDSKIESLSLSSREVSVTWLDDILSGYYDDIFSEERMQIPESNAKESQSLEEQEGKFSVPEDANEATEIQENGYSSSELDCDQSLLTQYSKMGEDNGNENENSYCQVKMVHMAEDGSMAIEEKEFLKKDRGEANEFVRNIMSGEEEQDTSKNWKIVIKRKKGSEDDDEARNFNPREPNFLPLVPEPEAEKVDLRHQMMDERKNAEEWMVDSALRQVVTKLAPARKKKVALLVEAFEMVMPIQKCEESHMRSNSSACDPHSTHIQACG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 141 179 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 581 603 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 463 482 - -
Stsc62336g00001 688 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 556 IPR044681 GO:0005516
Stsc62336g00001 688 SMART CaM_binding_2 551 661 IPR012417 GO:0005516
Stsc62336g00001 688 Pfam Plant calmodulin-binding domain 565 661 IPR012417 GO:0005516
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 24 45 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 94 130 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 1 179 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 463 501 - -
Stsc62336g00001 688 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62336g00001 Stsc-Chr62336 2101 6115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62336g00001 565 687 Calmodulin-binding Proteins AT2G38800 51.220 2.43e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62336g00001 - - adu:107458631 1010.75