Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62328g00001 ATGCAAGAGCTTGCCTTGAGAAATAGCGGTGCATCTTCTCTTAGAGTTACTGCGGTGGTATCGCCCTCAACCTGCGATGAGGTTGAGCTCAGTTTTACAAGAGAGAATTTGAGTCAATATGCAAAAGACATCAACTTGTCCTTCGAGCTCAATATCTTGAACATCGAATCGTTGAGCTCTCCTTCGTTTTCCCTGGCTGGACAATTCTTTGATAACGAGGCAGTTGCTGTAAATATGCCGCTTTCTTGTTTCACTCATCATCCGTCGCTGGTTCCATCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTAGACCGAAATTGCGACCGAATCGATGTGCCTCTTCCGACCAAGGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTTGAATCCCTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAAGCACTTCATCCAACCATCCATTAGGAAAGTGATCGTGGGTCACCACCATTACCATTCACAAGAAAAACTACCTCATTGGAGGAACCTGTTTGTTCAATCTGGATTCTCATCATTCTCATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGCGCACCCGTCCGGGGATTCCAAGTGGATCGAAATCATTCCTCTCTGGTTCTATGCTGGCAGCGAAAAGACCTCGTGTCTGTCTCAACTTGGAGATGCTAA 720 0.4569 MQELALRNSGASSLRVTAVVSPSTCDEVELSFTRENLSQYAKDINLSFELNILNIESLSSPSFSLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRKVIVGHHHYHSQEKLPHWRNLFVQSGFSSFSFSNFTEAQAECLVQRAPVRGFQVDRNHSSLVLCWQRKDLVSVSTWRC 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62328g00001 239 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 234 IPR005202 -
Stsc62328g00001 239 ProSiteProfiles GRAS family profile. 1 238 IPR005202 -
Stsc62328g00001 239 Pfam GRAS domain family 1 238 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62328g00001 Stsc-Chr62328 1039 1758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62328g00001 1 239 GRAS Transcription Factor Family AT4G00150 47.083 1.01e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc62328g00001 GRAS 5.5e-54 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62328g00001 - - gmx:100801785 385.185