Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc622g00002 ATGGCTGCAAAACTTGAAGGCAGAGCTTTTCTCTCTTCCTTTGTTGATGCTGTCTTGAACAAGCTCTCTTCTGTCAAGTCAACCCCAGTTGACCACAAGTTGCTTCGGAGGCTTAGAGCAAGCCTACGTGCCGCTCGACCTGTTCTTGATGATGCTGAGCAGAAGCAGATCAAAGATCAAGAAGTCAAGAAGTGGCTTGTTGACTTCCAAGATGCTCTCTATATGGCTGATGACTTGCTTGATGTGCTTTCCACTAAAGTTTCCACTCAAAGAGATCCAGGTACATGTTCTTCTTCCTGGTCTCGATATGTTGATTCCATCTTGGAAGAGAGTGATGATGATATTCAGTTAGTGAATAGCATGCAAGACATTGTTGATACACTGGAGTCTGTTGTTGAAGAGAAAGGTGATCTTGGTCTAAAAGATGAGGTTACCAAAGATATAGAGGACATGTCATGGAGAATTCAATCTTCCCTGATTGAATGTTCTGAGATATACGGCAGGGACAAAGACAAGGAGGCCATAGTTGAATTGTTGTTAGATTGTAGTACTTGTGATGATAAATTGTCTGTGATTTCTGTAGAAGGCATTGGTGGTATTGGAAAAACTACATTGGCTCAATTGGTTTACAATAATGCCAAAGTGGAGGGAAATTTTGACATCAGAGCATGGGTTTGTGTTGCTACCAAATTTGATCCTGTTAAAGCCACAAAGGCTTTGATAGAGGAAATAACTTCTTGTTCTTGTAACATGGTTAGCTTGAACTCGCTTCAAACCGAATTGAAGGATAGGCTGACAGGAAAGACGTTCTTAATTGTTTTAGATGATGTTTGGGACAATCAGCAAACTTTGTGGGACAATTTCTTAAAGCCCTTTTCGTTTGGGAATAAAGGAAGTAAAATTGTTTTAACAACTCGCAATGAAAATGTTGATTCTTTGGTTTCAGCTACTAATCTACATTACAAATTGGATATATTGTCTGACAAAGATTGCTGGTCAATGTTTCTAAAACATTCATCTCTTTCTACTAATTCTAGACAATATGCAACTCTAGAACAAATTGGTAGAAAAATTGTAAAAAAATGTAAGGGTTTGCCTTTGATTGTGAAGACACTCGGGGGTTTATTACGCAACAAGTATCATGAAGATGATTGGAAGAATGTATTGGAAAGTCAAATTTGGGAACTTTCAGAAGATGAGAGTAAGGTTGTTCCTGCATTAAGAGTTAGTTATCATTATCTCCCGTCACATTTAAAGAGATGTTTTGTTTATTGTTCGTTGTATCCCGAGGATTATCATTTTGACAAGGAGGAACTAATTTTGCTATGGATGGCTGAAGGTCTTTTGCAACCAACAGGAAAAAGCACATTAGAAAAAACTGGTTCTGCATATTTTAATGAGTTAGTTGCAAGATCATTTTTTCAACCTTCTAACACTAATCCCAACTTATTTGTAATGCACGATCTCATACATGATCTAGCAACCCTTTTTGCTGGAGAGTTCTATTTCAGTGCCAAAAACCATGGCAATGCACCCGAGATCAGCATCAAAACTCGCCACTTGTCATATATTGCTAAATCTTGGCATCCAATCTCAAAACTTCCAGAAGAACTAAGCAATGGAGCAATACATATGAGGTCATTTCTACCTATTTGTTTGTTTGCAGGTCATGGATTAACAAGGATAGAATGTGACTCTCTGCAATTTCTACTGCATTTGAGGTTCTTAAGAGTTTTGTCCTTCAAATGTTTTACTCTTAAATCATTGCCTAATTCAATAGGTGAACTGATCCATCTTCGTTATTTGGATCTCTCTTTTACACTTATTGCAACATTGCCGGAATCACTGTGTAAATTATACAATCTGCAAACACTGAAGTTGAGGAATTGCATTAAGCTAGAGATGCTTCCTTGCAGCATGCATGATCTTGTTAATTTGCGCCACCTTGACATTGAAGGAGCTTCTTGTTTGAAAGAGATGCCAAAGGGATTAAGCAACCTAAAGCATCTGAACTTCCTAAGTCAGTATATTGTTGGCAAGCATGAAGAGAATGGGATTAGAGAATTGGGAACACTAGACGGCCTTCACGGGTCACTTTGCATTGTCAAGTTAGAGAATGTCAGCAACAGTTGTGAAGCATTGGAGGCAAAGATGGGCAATAAGAAGCACATAAACATTTTAGAATTAAAATGGCTTCCAGGTAGTGATATTGTTGATTTTCAAACTTCAAGGGATATACTTGAAAAATTGCAACCTCATGGAGACTTGAATGAGCTATCGATCGAGGGCTACAAGGGTGAAACATTTCCAGATTGGTTAGGCCAAGGCTGTTTTTCTTACATGAATATGACTAAACTGAGTCTGAATCATTGTAAGAATTGCTGTCAGCTTCCTTCATTGGGACAATTACCCTCTCTAAAGCATCTGGAAATTTCTGAATTCGATGCGTTGGAAAGAATTGGCTGTGAGTTTTACAAGAATAATAAATCATTTCAGCAAGAGACACCCTTCAAATCTCTTGAAAGTTTGACATTTGAGAGAATGGATAGTTGGAGGGAGTGGCTTTTTTCTGATGAGTTTGATGCTTTTCCTCAGCTTAAAAGACTTTCATTAAGAGAGTGTTCTGTGTTAAATGGAGATCTTCCTAATTACCTTCTAGCTTTGGAGAACCTAACCATTGTTGAATGTGAACAACTTGCATGTTCACTGCCTAGAGCCCCCAAGCTTCATCAATTAGATGTAAAGGGTGTGAATCATATCAGAATGGAGGAGCCGCTTCATTGGGTAGTAATTGAAGGAACCAAGCTTGTGAGCTGCATATTAGAGTGGCTAGCCCACACCCAACCAACTCAACTTCAATGCCTAGTCATCAGAAAGTGTTCGCCGGACATATCACTCTCAGGGGCTAATATGCTTGCTTCATTACAAGAGCTGAAAATCTGGGATTGTTCAAAGTTAACATTCTCAGAGAAACTTCAACACAAGTCGCTAAGGGAGATAAATTTGTACAAGTGTGATTCACTCACTTTGTTACCACTGACTGACCTTCCAAATCTCAGGACACTCACAATTGATGCATGTAAAAGCATTGAATCTGTTGTAGTGCCACAAGATGTTGAATATGCTCTTCCATCTCTCTGTTATTTAGAGATCAAATACTGTCCTTGGTTTGTATCCTTGTCCACTCTAGTCTTGGCTACTCCCCATCTAGAGTATTTGACTATAACCAATTGCCCCAAAATCGATTCTTTTCCGGAAGGAAGCTTGACAAATCTTTGGATAAAAAACTGCCAGAAGCTAGCAAGGTATATAACTTCAAAAGGTTTGCATTGTCAAGGCCTTACTTCTCTTATCCTTTATTCATGGGATGATGTTACTTCATTCCCAAGAAAGGACTGTCTTCCTGCTTCGCTTCGATCTCTATGTCTGCGAGAGTTTCCGAATCTGGAGACTCTAGACTGTGGAGGACTTCAACATCTCACCTCCCTCAGAGAATTAACTATTGAACACTGTTGGAAGCTGGAGAATATCACACAAGAAAAGCTGCCTTCCTCCATAACAGAACTCCACATCAAAGACTGTCCTTTGAGGCATAAGCTCTATCGGATGAACGACCCACGAATTCAATATGAAAATTGA 3639 0.3899 MAAKLEGRAFLSSFVDAVLNKLSSVKSTPVDHKLLRRLRASLRAARPVLDDAEQKQIKDQEVKKWLVDFQDALYMADDLLDVLSTKVSTQRDPGTCSSSWSRYVDSILEESDDDIQLVNSMQDIVDTLESVVEEKGDLGLKDEVTKDIEDMSWRIQSSLIECSEIYGRDKDKEAIVELLLDCSTCDDKLSVISVEGIGGIGKTTLAQLVYNNAKVEGNFDIRAWVCVATKFDPVKATKALIEEITSCSCNMVSLNSLQTELKDRLTGKTFLIVLDDVWDNQQTLWDNFLKPFSFGNKGSKIVLTTRNENVDSLVSATNLHYKLDILSDKDCWSMFLKHSSLSTNSRQYATLEQIGRKIVKKCKGLPLIVKTLGGLLRNKYHEDDWKNVLESQIWELSEDESKVVPALRVSYHYLPSHLKRCFVYCSLYPEDYHFDKEELILLWMAEGLLQPTGKSTLEKTGSAYFNELVARSFFQPSNTNPNLFVMHDLIHDLATLFAGEFYFSAKNHGNAPEISIKTRHLSYIAKSWHPISKLPEELSNGAIHMRSFLPICLFAGHGLTRIECDSLQFLLHLRFLRVLSFKCFTLKSLPNSIGELIHLRYLDLSFTLIATLPESLCKLYNLQTLKLRNCIKLEMLPCSMHDLVNLRHLDIEGASCLKEMPKGLSNLKHLNFLSQYIVGKHEENGIRELGTLDGLHGSLCIVKLENVSNSCEALEAKMGNKKHINILELKWLPGSDIVDFQTSRDILEKLQPHGDLNELSIEGYKGETFPDWLGQGCFSYMNMTKLSLNHCKNCCQLPSLGQLPSLKHLEISEFDALERIGCEFYKNNKSFQQETPFKSLESLTFERMDSWREWLFSDEFDAFPQLKRLSLRECSVLNGDLPNYLLALENLTIVECEQLACSLPRAPKLHQLDVKGVNHIRMEEPLHWVVIEGTKLVSCILEWLAHTQPTQLQCLVIRKCSPDISLSGANMLASLQELKIWDCSKLTFSEKLQHKSLREINLYKCDSLTLLPLTDLPNLRTLTIDACKSIESVVVPQDVEYALPSLCYLEIKYCPWFVSLSTLVLATPHLEYLTITNCPKIDSFPEGSLTNLWIKNCQKLARYITSKGLHCQGLTSLILYSWDDVTSFPRKDCLPASLRSLCLREFPNLETLDCGGLQHLTSLRELTIEHCWKLENITQEKLPSSITELHIKDCPLRHKLYRMNDPRIQYEN 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc622g00002 1212 Gene3D - 11 114 - -
Stsc622g00002 1212 SUPERFAMILY L domain-like 485 897 - -
Stsc622g00002 1212 PRINTS Disease resistance protein signature 362 376 - -
Stsc622g00002 1212 PRINTS Disease resistance protein signature 191 206 - -
Stsc622g00002 1212 PRINTS Disease resistance protein signature 264 278 - -
Stsc622g00002 1212 PRINTS Disease resistance protein signature 801 817 - -
Stsc622g00002 1212 Gene3D - 410 495 IPR036388 -
Stsc622g00002 1212 Pfam NB-ARC domain 169 411 IPR002182 GO:0043531
Stsc622g00002 1212 Pfam Rx N-terminal domain 10 94 IPR041118 -
Stsc622g00002 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 425 IPR027417 -
Stsc622g00002 1212 Gene3D Ribonuclease Inhibitor 923 1061 IPR032675 -
Stsc622g00002 1212 Gene3D - 151 318 IPR027417 -
Stsc622g00002 1212 Gene3D Ribonuclease Inhibitor 552 922 IPR032675 -
Stsc622g00002 1212 Gene3D - 325 409 IPR042197 -
Stsc622g00002 1212 SUPERFAMILY L domain-like 939 1197 - -
Stsc622g00002 1212 Gene3D Ribonuclease Inhibitor 1087 1199 IPR032675 -
Stsc622g00002 1212 FunFam Probable disease resistance protein At1g63360 411 496 - -
Stsc622g00002 1212 PANTHER DISEASE RESISTANCE PROTEIN RP 46 898 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc622g00002 Stsc-Chr622 9576 13248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc622g00002 192 678 WRKY Transcription Factor Family AT5G45050 22.921 5.94e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc622g00002 - - ahf:112708719 1281.54