Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc622g00001 ATGATGCTTTTACAAGGAAAACACCAAATGGAAGCAACACGGGCCATGATCACAGGTGCAAGCATAGCAATTACACTTGCTGTGGTGTATTGGGCATGGAAGGTGGTGAACTGGTTATGGATGAGGCCAAAGAGGCTTGAGAAGCTGCTTAGAAAGCAAGGACTTAATGGTAATTCTTACAGGCCCTTTGTTGGAGATGTTTTGGAAATGGTGAAGATGGGAACTGAAGCCACTTCCAAACCCATGAACCAACTCTCTGATGATATTGTTCCTCGTATCTTCTCCTTCTTCTGTCACACCATCAACAAATACGGCAAGAACTCATTTACTTGGTTTGGACCAACACCAAGGATTATCGTCACGGATCCTCAGCTTGTCAAAGATTTATTGAATAACAACCATGACTTCCCGAAACCTTATGTAAATCCACTTATTAGCATACTAGTTACTGGTCTTGTTAACCTTGAGGGTGAGAAGTGGAACAAGCACAGAAGGATTATCAACCCTGCATTCCATGTAGAAAAATTGAAGAGTATGCTACCAACATTCTTCAAAATTTGCAATGATATGATCAACAAATGGGAGGAGAAGTTGGCGTCAGAAGGAGGATCATGTGAAATGGATGTATGGCCTTCTCTTCAGAATTTGACCAGTGAAATTATTTCTCAAACAGCATTTGGAAATCTTGAAGAAGGAAGAAGAATAACGGAACTTCAAAAGGAGCAAATTCAACTTATATCAAAAGTTATATTGAAAGTTAGCATTCCGGGATGGAGGTTTCTACCAACAAGTACAAAAAGGAGGATTATGCAAATTGATAGGGAGATTGAAGAATTGCTTATTGATATGATTACTAAAAGAGAGAAAGCATTTGAGGCAGGTGAAGCTACCAAGAACGATTTACTAGGAATACTTTTGGAGTCGAATCACAAGGAAATTCAAGAACATGGGAACAACAAGGATGTTGGAATGACATTAAAAGATGTGATTGAAGAATCCAAGGTATTCTATGTTGCCGGGCAAGAAACCACTTCCAATTTGCTTGTTTGGACTATCGTGTTACTAAGTAGGTTCCCTGATTGGCAAGCTCGGGCGAGAGATGAAGTCATAGAGTTCTTTGGCAACCAAAAACCAGACTTTGATGGTCTAAGTCACCTTAAGATTGTTACAATGATTTTATACGAAGTTCTTAGGCTATACCCTCCAGCAACTATAGTTGTTCGAACAGTTCACAAGGATATGAAACTTGGAAATTTAACTTTACCTGAAGGAGTGCAGATAGCCATACCAAGCCTTATGATTCACCATGACTCTACTCTGTGGGGAGATGATGCGAACGAGTTCAAACCGGACAGGTTTTCTGAAGGAGTTTTAAAGGCAACAAATGGCCAAGTTTCATTCCTTCCGTTTGGATGGGGTCCGAGGATATGCATTGGGCAAAACTTTGCCATATTGGAGGCTAAGATGGCTTTGGCACTTATTTTACAGCGTTTCTCTTTCGAACTTTCTCCGGCGTATTCCCATGCTCCAATCACCTCACAAACTCTTGGGCCAAAATATGGTGCTCAAGTCCTGCTACATAGATTGTAA 1590 0.4057 MMLLQGKHQMEATRAMITGASIAITLAVVYWAWKVVNWLWMRPKRLEKLLRKQGLNGNSYRPFVGDVLEMVKMGTEATSKPMNQLSDDIVPRIFSFFCHTINKYGKNSFTWFGPTPRIIVTDPQLVKDLLNNNHDFPKPYVNPLISILVTGLVNLEGEKWNKHRRIINPAFHVEKLKSMLPTFFKICNDMINKWEEKLASEGGSCEMDVWPSLQNLTSEIISQTAFGNLEEGRRITELQKEQIQLISKVILKVSIPGWRFLPTSTKRRIMQIDREIEELLIDMITKREKAFEAGEATKNDLLGILLESNHKEIQEHGNNKDVGMTLKDVIEESKVFYVAGQETTSNLLVWTIVLLSRFPDWQARARDEVIEFFGNQKPDFDGLSHLKIVTMILYEVLRLYPPATIVVRTVHKDMKLGNLTLPEGVQIAIPSLMIHHDSTLWGDDANEFKPDRFSEGVLKATNGQVSFLPFGWGPRICIGQNFAILEAKMALALILQRFSFELSPAYSHAPITSQTLGPKYGAQVLLHRL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc622g00001 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 SUPERFAMILY Cytochrome P450 91 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 521 - -
Stsc622g00001 529 Pfam Cytochrome P450 93 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 Gene3D Cytochrome P450 39 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 FunFam Cytochrome P450 734A1 40 529 - -
Stsc622g00001 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Stsc622g00001 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc622g00001 529 CDD CYP72 94 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc622g00001 Stsc-Chr622 4820 8291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc622g00001 9 529 Cytochrome P450 AT3G14690 53.920 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc622g00001 - - gmx:100780780 731.48