Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62202g00001 ATGTGGTGCATTTCCACCACCACCACCACTACCACCACCCTCTTCTTCCTCCTCCTCTTCTCGGAGTTATCTTACTCCCAGCTCCACCACCACCAGCATAGGAGGATCCTCCACCAACCTCTTCTTCCACAGCCACAAAACTCATCCCCCACTAATCCCTCACCACCACCATCACCACCACCTTCTCCAAACCCAAAGTTCCCATTTTCAACAACACCCACTTCTCAAAATTCCCCCTTTTTCCCATTATACCCTTCTCCGCCGCCACCACCATCTCCCTCCGCCTTCGCTTCTTTCCCTGCTAACATCTCCTCTCTCATTCTCCCTCACCCTTCTAACTCCAAACACTCCTCCCCTAAACTCATTGCGGGAGCTGTAACCGCCGTTGTTCTCGCCGCCGCAGTCTCCGTCGTCTCCGCCGCCGTGTACTGCCGTAGACGGCGGAGACGGAACCAGTCTGCCGATGACAAGACTCTCAGATCCGACAGCAGCATTCGCCTCTTCCCCCGTGAGCCTCCCGGCGGCGGCGGTGGTCGGAAAACCAGAAACCCTTCTTCCACCAGCTCCGAGTTTCTCTACCTTGGCACTATTGTGAACTCCAGAGGCATCGACGACCGCACCGCCGGCACTGGCGGTGGCCGGAACAGCTCCGGCGGAGGGGACGCCAACTTGAATCCTCGAAAAATGGACTCGCCGGAGCTTCAACCGCTTCCGCCGCTTGCACGACAGAGTTCAAGAATGCAGCAGCGAGATTCCGGCACGGCGGCGACAGTTACGGCGGCGGATGATGAAGAAGAAGAATTCTACTCACCAAGAGGGTCGTCATTGGGCGAAAGATCGGGTTCCCGGCGAGTATTCTCCGCCGTAGCAGGCGTCGATAAACTCGCCGGCGGCCATAGCTGCTCCGATTCAAGCTCCGGCTCGTACTCTTCCTCCACCTCCAACTCGCCGGACCGATCACACTCCATCAGCCTCTCTCCGCCGGTGAGTATCAGCCCCAGAAGATCCCAACCGAAGTCGCCGGAAAATCACATTCCACCACCGACACTAACCGGAGATAACAGAAGCAGAAGCAGAAGCTCAGTCTCATCATCCAATCTCTCTTCGCCACGTGTCCTCTCACCTTCACTGTCCCCAGCTCACAACAACAATAACAGCAACACGAACTACACTCAAACGGCGTCGTATTCAACAACCCCAGAACGAGAACTTAACCAGTCACCGTCGCTTTCACCGATTTCTCTCTCACCGAATCGTTTGAATCTAAAAGTCTCAGATGGGTCACCGAAAATTACAGAAAAGTCTCAGACTTTAGCTTCTTCACCGGAGAAAGTGAAGGTTAGTGAAGTCTTTTCACCAGAGAGGCTATCCAATGCTTCTAATGGTAGTGGAAAGAGTAGTAGTGCATTATCGTCTTCCACTTTTTCGCTTCCTTCACCGGATAAGGTTACAACTTTGATGCATCAGAATCATGGGTTGGATCAGTCTCCAACTATTTCTGATGTTTCAGATCGGTATAGGCATTCTCCAATTTCATCAATGCCTTTGTCACCATCTTTGTTGTCATCACCGGAGAGAGATTTGAATTCTCATGCTCCTCCACAACAGAGGAAGCATTGGGAGATTCCAGACCTGTTGACACCACCCGTTACTGAATCTTCATCAATGGAGAGTGTTTTTGGAGCAGCAACATCTGTTGTGGTTCCACAGAGGAAACAATGGGAGATTCCGGCGATTCCGGTGATTTCGGCACCTATTGATCCATCTGGTAGAGTTTCAGCTCCTCCTCCGCCTCCGCCGCCACCTCCTCCACCGCCCCCGCCACCTATGCTGCCGCGACAGCGCAAGCAGTGGGAAGTGCCTTCTCCGTCGACACCTGGGGATCAACCAATTTCGAGGCCACCGGAGCTGACACCACCTACTAGGCCTTTTGTGTTGCAGACACCAAATACAAAGGTTTCTCCGGTTGAGTTGCCGCCGAATTCGGGATTGGGAGTGATTGAGGAGAATGCTGACGAAGGTTCTAAGCCAAAGCTTAAGCCTTTGCATTGGGATAAAGTGAGGGCAAGTTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCCTTCAAATTGAATGAGGAGATGATTGAGACATTGTTTGTAGTGAACACGCCAAACCCCAAACCCAAGGACACTACTCCACGCTCGGTTCTTGCTCCTCCACATCAGGAGGATAGAGTGCTAGATCCCAAGAAGTCCCAAAACATTGCCATATTGTTAAGAGCGCTCAACGTGACTATAGAAGAAGTGTGTGACGCACTGTTAGAAGGTATAACTGATACACTAGGAACAGAACTGCTCGAAAGCTTGTTAAAAATGGCACCTAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGACTCGCCAACCAAGCTTGGTCCTGCCGAGAAATTTTTGAAGGCAGTGCTTGATGTGCCTTTCGCGTTTAAACGGGTGGAAGCAATGCTTTACATTGCTAATTTTGAGTCCGAAGTGGAATATCTTAGGAAATCTTTTCAAACTCTAGAGGCTGCCTGTGACGAGCTGCGAAACAGCCGTATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGTAACCGCATGAATGTGGGGACAAACCGAGGCGATGCACATGCCTTCAAGCTTGATACGCTTCTCAAGCTGGTTGATGTCAAAGGCGCAGACGGTAAAACAACTTTACTCCACTTTGTGGTACAAGAAATCATTAGAACCGAAGGGGCTCGCCTCTCGGGCACCAACCAAACTCCAAGCACGACCACCAATGAAGATGTCAAATGCCGGAGGCTTGGCTTACAAGTAGTCTCTAGCCTAAGCTCAGAGCTAGCAGACGTGAAGAAATCCGCTGCCATGGATTCTGAAGTTCTCAGCAGTGAAGTTGCTAAACTCTCCAAAGGGATTGCACTCATCACTGAGGTTGTGAAGCTAAACCAAACATTAGGACCAGATGAAAGCAATCACAAATTCACGGAATCGATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATACTAAAGATTCAAGCACAAGAGAGTGTTGCAATTTCGCTTGTGAAAGAGATCACCGAGTATTTCCATGGAAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTAAGAGACTTCTTGAATGTTCTTGATAGGGTTTGCCGGGAAGTTGGTATGGTTAATGAGAGAACCATGGTTAGTTCTAATCATAGATTCCCTGTACCGGTGAACCCTTTGCTTCCACAACCTCTAAACCCTATGCTTCCACAACCTCTTCCTGGTTTACATGGAAAGAGAAACTATAGTTCTTCAGATGATGATAGTTCTTCATCACCTTAA 3393 0.4981 MWCISTTTTTTTTLFFLLLFSELSYSQLHHHQHRRILHQPLLPQPQNSSPTNPSPPPSPPPSPNPKFPFSTTPTSQNSPFFPLYPSPPPPPSPSAFASFPANISSLILPHPSNSKHSSPKLIAGAVTAVVLAAAVSVVSAAVYCRRRRRRNQSADDKTLRSDSSIRLFPREPPGGGGGRKTRNPSSTSSEFLYLGTIVNSRGIDDRTAGTGGGRNSSGGGDANLNPRKMDSPELQPLPPLARQSSRMQQRDSGTAATVTAADDEEEEFYSPRGSSLGERSGSRRVFSAVAGVDKLAGGHSCSDSSSGSYSSSTSNSPDRSHSISLSPPVSISPRRSQPKSPENHIPPPTLTGDNRSRSRSSVSSSNLSSPRVLSPSLSPAHNNNNSNTNYTQTASYSTTPERELNQSPSLSPISLSPNRLNLKVSDGSPKITEKSQTLASSPEKVKVSEVFSPERLSNASNGSGKSSSALSSSTFSLPSPDKVTTLMHQNHGLDQSPTISDVSDRYRHSPISSMPLSPSLLSSPERDLNSHAPPQQRKHWEIPDLLTPPVTESSSMESVFGAATSVVVPQRKQWEIPAIPVISAPIDPSGRVSAPPPPPPPPPPPPPPPMLPRQRKQWEVPSPSTPGDQPISRPPELTPPTRPFVLQTPNTKVSPVELPPNSGLGVIEENADEGSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPPHQEDRVLDPKKSQNIAILLRALNVTIEEVCDALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACDELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSTTTNEDVKCRRLGLQVVSSLSSELADVKKSAAMDSEVLSSEVAKLSKGIALITEVVKLNQTLGPDESNHKFTESMNKFMRMAEEEILKIQAQESVAISLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLNVLDRVCREVGMVNERTMVSSNHRFPVPVNPLLPQPLNPMLPQPLPGLHGKRNYSSSDDDSSSSP 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 202 282 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 46 68 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 41 87 - -
Stsc62202g00001 1130 ProSiteProfiles Formin homology-2 (FH2) domain profile. 669 1094 IPR015425 -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 149 189 - -
Stsc62202g00001 1130 Pfam Formin Homology 2 Domain 674 1068 IPR015425 -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 295 552 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 719 743 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 1101 1130 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 643 657 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 299 339 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 585 662 - -
Stsc62202g00001 1130 SMART it6_source 669 1083 IPR015425 -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 347 443 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 453 530 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 241 256 - -
Stsc62202g00001 1130 SUPERFAMILY Formin homology 2 domain (FH2 domain) 598 1078 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 627 642 - -
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 590 614 - -
Stsc62202g00001 1130 Gene3D Formin, FH2 domain 664 1078 IPR042201 -
Stsc62202g00001 1130 PANTHER FORMIN-RELATED 392 1121 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc62202g00001 1130 MobiDBLite consensus disorder prediction 149 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62202g00001 Stsc-Chr62202 3309 8707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62202g00001 34 355 FH2 protein (formin) Gene Family AT3G25500 42.136 1.32e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62202g00001 - - gmx:100802678 1169.45