Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62193g00001 ATGGCTACACCAGCTGACGAAGGACAACTTATAAACATGCTGATTAAGCTCATAAATGCAAAGAACACCATGGAAATTGGTGTCTACACCGGCTATTCTCTACTCTCCACTGCTCTTGCTCTTCCTCATGATGGAAAGATCTTGGCCATGGACGTGAACCGACAATATTATGAGATAGGATTGCCCATAATTGAAAAAGCTGGCGTAGCTCATAAGATTGACTTTAGAGAAGGACCTGCTCTTCCTTTACTTGATGAATTGATTAAAGATGAAAGTTACAAGGGTGCATTTGATTTTATTTTCATTGATGCGGATAAGGACAACTACTTGAACTACCATAAGAGAGTGATTGAGCTTGTTAAGGTTGGGGGGCTGATCGGGTACGACAACACCCTATGGTTTGGATCTGTGGCTTACTCTGAAGACACACCAATGCTTGATTTTGTGAAGTATTTCCGCACTCATGTGCTGGAGATAAACAAGTATCTCGCTAATGATCCAAGGGTTGAGATTTGTCAGCTCCCCGTTGGTGATGGCATTACCCTGTGCCGCCGCATCAACTGA 564 0.4309 MATPADEGQLINMLIKLINAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNRQYYEIGLPIIEKAGVAHKIDFREGPALPLLDELIKDESYKGAFDFIFIDADKDNYLNYHKRVIELVKVGGLIGYDNTLWFGSVAYSEDTPMLDFVKYFRTHVLEINKYLANDPRVEICQLPVGDGITLCRRIN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62193g00001 187 PANTHER O-METHYLTRANSFERASE-RELATED 1 186 - -
Stsc62193g00001 187 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 186 IPR002935 GO:0008171
Stsc62193g00001 187 Pfam O-methyltransferase 1 186 IPR002935 GO:0008171
Stsc62193g00001 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 185 IPR029063 -
Stsc62193g00001 187 Gene3D Vaccinia Virus protein VP39 1 186 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62193g00001 Stsc-Chr62193 2530 4140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62193g00001 1 187 Monolignol Biosynthesis Gene Families AT4G34050 75.936 3.85e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62193g00001 K00588 - gmx:100795858 310.457