Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62190g00002 ATGGAGCAAGCAATTGTGGACAACATAATAAACCGATTGCTAGAAGTTCGGGGGCGGCCAGGGAAGCATGTGCAGCTCTCAGAATCGGAGATCAAGCAGCTATGTACCGCTTCTAGAGAGATTTTCTTGCAACAGCCCAATTTGCTGGAGCTTGAAGCCCCCATTAAGATTTGTGGTGATATACATGGTCAATATTCTGATCTTTTAAGGCTTTTTGAGTATGGTGGATTTCCACCTGAGGCCAACTACTTATTTTTGGGTGATTATGTAGATCGAGGGAAGCAGAGTTTAGAAACAATTTGCCTTCTCCTTGCTTATAAAATAAAATATCCCGAGAACTTTTTCCTTTTGAGGGGGAACCATGAATGCGCTTCAATAAACCGTATATATGGATTTTATGATGAGTGTAAAAGAAGATTCAATGTAAGATTATGGAGAACATTTACAGAATCCTTCAATTGCTTGCCTGTGGCAGCTCTCATTGATGAAAAAATTTTGTGCATGCATGGGGGACTCTCTCCTGACTTAAACAATTTGGATCAGATTAAAAATCTACAGCGACCAACGGATGTACCAGATACAGGCTTGTTATGTGATCTTCTATGGTCAGATCCAAGCAAAGAAGTCCAAGGTTGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGTAGATAAAGTCTCCGAGTTTCTCCAAAAACATGATTTAGATCTTATTTGTCGTGCTCATCAGGTTAAACTCCTGCCTTTAGTGCCTAATGTGTTATCAGGTGGTGGAGGATGGATATGA 792 0.4053 MEQAIVDNIINRLLEVRGRPGKHVQLSESEIKQLCTASREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWRTFTESFNCLPVAALIDEKILCMHGGLSPDLNNLDQIKNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGVDKVSEFLQKHDLDLICRAHQVKLLPLVPNVLSGGGGWI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Stsc62190g00002 263 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Stsc62190g00002 263 Pfam Calcineurin-like phosphoesterase 54 245 IPR004843 GO:0016787
Stsc62190g00002 263 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 246 - -
Stsc62190g00002 263 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Stsc62190g00002 263 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Stsc62190g00002 263 Gene3D - 1 250 IPR029052 -
Stsc62190g00002 263 SUPERFAMILY Metallo-dependent phosphatases 18 248 IPR029052 -
Stsc62190g00002 263 SMART pp2a_7 26 255 IPR006186 GO:0016787
Stsc62190g00002 263 FunFam Serine/threonine-protein phosphatase 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62190g00002 Stsc-Chr62190 2117 6940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62190g00002 55 242 Calmodulin-binding Proteins AT5G63870 32.735 3.25e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62190g00002 K06269 - gmx:100799218 490.345