Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62186g00001 ATGCCGGTTCATCACCAACCCCAGCATGTGCCACATACCATGATCCAGCATCAATCGGGCCAGTCCTCGGCTTTTCCGCTTACAATGGGGACCATGTGTGATCAGACTATGTCAATTGCTGAGTTTGGTAAGGGAGATGGAAGCAAAAACTCTGCGAGCGAGGAAGATGAGCCGAGTTTGGCTAAGAATGGTGGTGATGGTCATCATGAAGCAGGCAGAACGAAGAAGGGATCGCCTTGGCAGCGGGTCAAGTGGACTGATGAGATGGTGAAGCTTATGATTACAGCTGTTTCGTATATAGGTGAGGATTCGACTTCTGATGTTGCCGGAAGAAGAAAAGCGGTGATCCTTCAAAAGAAGGGCAAATGGAAGACTATTTCCAACGTCATGGCTGAAAGAGGCTATCATGTTTCGCCTCAGCAGTGTGAGGATAAATTCAATGACCTCAATAAACGCTACAAAAAGCTTAACGATATGCTCGGCAGGGGCACTTCTTGTCAGGTTGTTGAAAAGCCTGCGCTGTTGGATTTAATTGACTATCTTTCTGAGAAAGAAAAAGATGATGTTCGGAAGATACTAAGCTCGAAACAGCTCTTTTATGAAGAGATGTGTTCTTACCATAACAATAACAGATTGCATTTACCCCATGACGTTGCATTGCAACGATCACTGCAGCAAGCTCTCCGAAGCAGAGATGATCGTGACGAAGATGATCAAGATATGGAAACTGATGATCATGAGGAATTTGAAGAGAATCATGCTTCGCACGGGGATTGCAGAGGAATCGATGGGGCATCAGTGGGACCTATGAAGAAATTAAAACAACGACAAGGCCAAGAAGATGCTGCTACTTTTGGGAATTCTTTAAATTGTCAGGAATATAACAAAAGTTTAAACACTCATGGACAGATGATCCAATCAGACGGGAATCAAGCTTTACCTGAAAACATGAGAGCGGCATTGCTTCAGAACCAATGGATTGAATCTCGCACGATCCAGTTAGAAGAACAGAAGCTTCAGATACAGATTGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGTTGGAGCTGTTGAAGCTGGAGAATGAAAGGATGAAGCTTGAGAACGAACGTCTTGCGTTAGAGCTGAAGCGAAGGGAATTGGGTGCTGGTTTGAAATAG 1194 0.4439 MPVHHQPQHVPHTMIQHQSGQSSAFPLTMGTMCDQTMSIAEFGKGDGSKNSASEEDEPSLAKNGGDGHHEAGRTKKGSPWQRVKWTDEMVKLMITAVSYIGEDSTSDVAGRRKAVILQKKGKWKTISNVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVEKPALLDLIDYLSEKEKDDVRKILSSKQLFYEEMCSYHNNNRLHLPHDVALQRSLQQALRSRDDRDEDDQDMETDDHEEFEENHASHGDCRGIDGASVGPMKKLKQRQGQEDAATFGNSLNCQEYNKSLNTHGQMIQSDGNQALPENMRAALLQNQWIESRTIQLEEQKLQIQIEMLEVEKQRFKWQKFSKKKDRELELLKLENERMKLENERLALELKRRELGAGLK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62186g00001 397 MobiDBLite consensus disorder prediction 48 82 - -
Stsc62186g00001 397 Pfam Myb/SANT-like DNA-binding domain 82 206 IPR044822 -
Stsc62186g00001 397 Gene3D - 85 155 - -
Stsc62186g00001 397 MobiDBLite consensus disorder prediction 1 22 - -
Stsc62186g00001 397 MobiDBLite consensus disorder prediction 224 281 - -
Stsc62186g00001 397 MobiDBLite consensus disorder prediction 41 82 - -
Stsc62186g00001 397 PANTHER F16F4.11 PROTEIN-RELATED 1 394 - -
Stsc62186g00001 397 Coils Coil 359 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62186g00001 Stsc-Chr62186 8424 10568 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc62186g00001 Myb_DNA-bind_4 4.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62186g00001 - - gmx:100816474 552.362