Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62124g00001 ATGAAGAGGATGGTGCCGGAGGTGGAGGTTGATCTAACGGGAAGGCCGGGGATGGTGGAAGCGGCGATGAGAAGAATAAGAAGAAGAGGAGAAAGCGGCGGCGGCGACGTCTTGATCGATGGCAGTAGCAGTCTGTTAGTGCTTTCAGGGAAGGAAGAAAGAGGAAGAAGCTCATGTGCTCTCCCCTCACATATTATAGCTATGGATCCAAACAGAGAAGCATATGAAATAGGACTGCCAAGCATAAAAAAAGCTGGTGTGGAACACAAGATTGAGTTCATAGAGTCTCCAGCTTTACCCATACTTGATAGCCTCTTGGAAGATACCAACAACGAGGCGAGTTTCGACTTCGCCTTTGTCGACGCCGATAAAGACAATTACTGGAATTACCACGAACGGCTTCTAAAACTGATCAAGATAGGAGGGATGATTATATATGATAACACGCTTTGGGGTGGAATGGTTGCATGGCCGGAAGAGGAAGTTCCAGCAATAAAAAAACCGTACAGGGAAGCCGTTCTCAGCTTCAACAAAGCCATCTCTGAAGATTGCCGAATTGAAATTGCCCTTGCTTCTATAGAAGCCCATGCGTCCTTGTCCTGTGAAGATCCTGACCGCCTCGCCACTGGCATCGAAGTCTCTGTCTTCACTGTTGCTAACGTTAGAGACTACGATGCCGTAAAGCGCACGGTGAACGAGGTTGGACCAATCGACGTGCTACTATTGAACCACGGCATGTTCGTGGCGCTTGTGGTGGTGGTAGCGAGATTATAG 774 0.4845 MKRMVPEVEVDLTGRPGMVEAAMRRIRRRGESGGGDVLIDGSSSLLVLSGKEERGRSSCALPSHIIAMDPNREAYEIGLPSIKKAGVEHKIEFIESPALPILDSLLEDTNNEASFDFAFVDADKDNYWNYHERLLKLIKIGGMIIYDNTLWGGMVAWPEEEVPAIKKPYREAVLSFNKAISEDCRIEIALASIEAHASLSCEDPDRLATGIEVSVFTVANVRDYDAVKRTVNEVGPIDVLLLNHGMFVALVVVVARL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62124g00001 257 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 217 IPR002935 GO:0008171
Stsc62124g00001 257 Pfam O-methyltransferase 64 194 IPR002935 GO:0008171
Stsc62124g00001 257 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 188 IPR029063 -
Stsc62124g00001 257 Gene3D Vaccinia Virus protein VP39 39 200 IPR029063 -
Stsc62124g00001 257 PANTHER O-METHYLTRANSFERASE-RELATED 60 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62124g00001 Stsc-Chr62124 1745 3376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62124g00001 57 193 Monolignol Biosynthesis Gene Families AT4G26220 58.273 1.20e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62124g00001 K00588 - gmx:100792717 214.157