Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62108g00001 ATGTTGCTGCATCCAAACGTGGCCTCCGTACTAAGAAGCATAAGAACATTGTTACTACGTCCGCCAAGAATGCTCTCGCCGTCGCCGCCTTCTTTCGCCGCAGCACCCTCGGAAACAACGTTACCCTCCTCCCTCTCCGCCTCACCTTCCATGTCTTCATTCCACCACTTCCCTATCTCTTCCACATCCTCAAACTCTCACACACTTCACACCACAATGACCCGTTCCAATTCCAAGTGCTTCTTCTCTTCTGCGAACACCACAACTCCGATTGACATATCGGGGATGACCCGAACCGAGAATCCAGAACCCGAACCCGACGTGGATGGGTCTTTGGTGGTGGTTTCGTTCTACAAGTTCGCGGATTTCTCTGACCATGCATCTATGAGGAAACCCTTGAAGGAGCTTTGCCAACAACTTCGTGTTTCAGGCGGCATTATTCTTGCACCTGAAGGGATCAATGGCAGCATATGTGGCACTCGAGAGTCGGTGGAGAAAGTTCTTGCATTCATACAAAGTGATGACCGATTGAAAGGGCTAAGACATGTTGAATCGCCTGTTACTCCCGAGGAGGAAGCCATTCACCATGGACACAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGGTGGGATCATGTGAGGGTCAAATTGAAGAAAGAGATTGTCACGCTCGGGATGCCTAGCGTATCACCTATTGAAAAGGTTGGGAAATATGTTGGCCCAAAAGAGTGGAATGCTTTGATTAGTGATCCAGATACGGTTGTGATTGATGTGAGGAATAACTACGAAACCAGAATAGGAAAGTTCAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGAGAATTCCCCTCTTGGGTGGAGTTGCATTTCCGGCTTACTGGATGTGGGCTTCCGGAAGTTGAGGTAAATAATTCAGTTGAAAGTAATGAAAATGAAGTGGAGAATCCAAAAAAAATTATGCCAAAACGTGTCGCAATGTATTGCACCGGAGGTATTCGTTGCGAGAAAGCTACAAGTCTACTTCTCAGAAAAGGTTTCAAAGAGGTTTATCACCTTGAAGGTGGAATCCTGAAATATCTTGAAGAGGTTCCAGAGAAACAGAGCCTCTGGGAGGGTGAGTGCTTTGTCTTCGACAAGCGAGTCTCAGTTGAGCACGGGTTGGTGCCGGGAAGCTTCAAGCTCTGCTATGGTTGCAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCTGAGTATGAATATGGGGTTTCTTGTCCTTACTGCTTTTCATCGAAATCAGAAGAAGAGAGGGAGAGGGCTCGTGCCCGACATCGACAATTCGAGAGATGGGGAATCATAGGCGGTCCAGATAAGGTTCGCCGGCCATCAAGTAAACTAGACAGTGTCTGTGCAAAACCAAACCAACCAAACCAACTTTCACGTTCCATCTAA 1446 0.4786 MLLHPNVASVLRSIRTLLLRPPRMLSPSPPSFAAAPSETTLPSSLSASPSMSSFHHFPISSTSSNSHTLHTTMTRSNSKCFFSSANTTTPIDISGMTRTENPEPEPDVDGSLVVVSFYKFADFSDHASMRKPLKELCQQLRVSGGIILAPEGINGSICGTRESVEKVLAFIQSDDRLKGLRHVESPVTPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPSVSPIEKVGKYVGPKEWNALISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVELHFRLTGCGLPEVEVNNSVESNENEVENPKKIMPKRVAMYCTGGIRCEKATSLLLRKGFKEVYHLEGGILKYLEEVPEKQSLWEGECFVFDKRVSVEHGLVPGSFKLCYGCKQPVSDADMEAPEYEYGVSCPYCFSSKSEEERERARARHRQFERWGIIGGPDKVRRPSSKLDSVCAKPNQPNQLSRSI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc62108g00001 481 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 105 436 IPR020936 -
Stsc62108g00001 481 MobiDBLite consensus disorder prediction 32 47 - -
Stsc62108g00001 481 MobiDBLite consensus disorder prediction 466 481 - -
Stsc62108g00001 481 SMART rhod_4 243 370 IPR001763 -
Stsc62108g00001 481 CDD RHOD_YceA 240 366 - -
Stsc62108g00001 481 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 222 399 IPR036873 -
Stsc62108g00001 481 MobiDBLite consensus disorder prediction 451 481 - -
Stsc62108g00001 481 Pfam Rhodanese-like domain 245 366 IPR001763 -
Stsc62108g00001 481 Gene3D - 103 226 - -
Stsc62108g00001 481 ProSiteProfiles Rhodanese domain profile. 253 373 IPR001763 -
Stsc62108g00001 481 MobiDBLite consensus disorder prediction 28 47 - -
Stsc62108g00001 481 Gene3D - 227 406 IPR036873 -
Stsc62108g00001 481 Hamap tRNA uridine(34) hydroxylase [trhO]. 110 410 IPR020936 -
Stsc62108g00001 481 Pfam UPF0176 acylphosphatase like domain 113 225 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc62108g00001 Stsc-Chr62108 6536 12166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62108g00001 110 472 Sulfurtransferasese or Rhodanese AT2G40760 76.087 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62108g00001 - - gmx:100784854 630.172