Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc620g00003 | ATGGGTAAAAGAAAAGGTTCACCTCTAAATCATGAGCAAGTTATAGGGTCAGAACCCGACAACATCAATGAATCTTCGAATGGAAAAGCCTCTATAAAGGGTTTTAACTTCATTGATGAAAGGATAATGAATGGAAATTGGGTTAATGAACCTCATGCTGATGTCATCCGGAGATTCTTTCGCCTTTTGGCTATCTGTCATACGGCTATACCAGAAATGGATGAAGACACTGGAAATGTCTCGTATGAGGCTGAATCGCCTGATGAAGCAGCATTTGTGATTGCAGCCAGAGAAATTGGTTTCGAATTCTGTAAAAGGACTCAGACTAGCGTATCAACTTTTGAGTTGGATCCTGTTTCTGCCAAAAAAGTTGAAAGGGTGTACAAGCTTCTCAATGTGTTGGAATTTAATAGCTCGAGGAAGAGGATGTCAGTGATAGTGGAGGATGAAGAAGGAAAAATTTTTCTATTATGCAAAGGCGCCGATAGTGTCATGTTTGAAAGGCTAGCCAAGAATGGGAGGGAGTTCCAAGATAAGACCATGGAGCATGTTCATGATTATGCCGATGCAGGTCTAAGGACCTTGATATTAGCCTATCGGGAACTCGATGCGGAAGAATACAAGGAGTTTCGCGACAAATTCTCTAAGGCTAAGAATTTGGTTTGTGCTGATCAGGAGAGACAGATTGAGAAAATATCAAACAAGATTGAGAGGAATCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAACTCCAAAACGGGGTTCCCGATTGCATTGACAAGCTTGCCCAAGCAGGAATCAAGATTTGGGTTTTGACCGGGGATAAAATGGAGACTGCAATCAATATAGGTTTTGCTTGTAGTTTGTTAAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGAGTCCAGAAATTAAAGCACTGGAAAAGGATGGAGACAAGCTTGCTATAATCAAGGCATCGAGGCAAAGTGTCCTCCAACAGATATCCGAAGGTGCTGCACAAGTGACAGCATACAGAGGAAGTTCTCAGCAGGCGTTTGCTTTGATCATTGACGGAAAATCACTCGTCTATGCTCTAGATGATAACATCAAGAACATGTTTCTAGAGCTTGCGATTCGCTGTGCATCTGTTATCTGCTGTCGCTCGTCACCAAAGCAGAAGGCGCTGGTTACTAGATTGGTCAAATCTGGAACTCGGAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATTAGTGGCGTCGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCGCAATTCCGATATTTGGACCGATTACTTCTTGTGCACGGACATTGGTGTTACCGGAGGATCTCGTCTATGATATGCTATTTTTTCTACAAGAACATCACATTTGGATTCACATTGTTCTTATATGAGGTGTATGCATCCTTCTCCGGAGAACCTGCATACAATGATTGGCTTTTATCTATCTATAATGTCTTCTTTTCATCCCTTCCCGTGATTGCTCTCGGGGTGTTCGACCAGGATGTATCGGCTCGGTACTGCCTAAAGTTTCCGTTGCTATATCAAGAAGGAGTGCAAAATGTCCTCTTTAGCTGGCGGCGAATACTCGCATGGATGCTTAACGGATTCATTAGCGCCATACTAATTTTCTTCTTCTGCACGAAAGCCATGGAACTTCAGGCCTTCGACTCGGAGGGAAGAACCGCCGGAAGAGATATACTCGGAGCAACCATGTACACTTGCGTGGTCTGGGTAGTAAATTTGCAGATAGCTTTAGCTATAAGTTACTTCACCATGATCCAACACATTTTCATCTGGGGTTCGATCGCTTTCTGGTACATCTTCCTTCTGGCATACGGTGCGATGTCCCCGCATTTTTCGACGAATGCCTATGAAGTCTTCGCCGAGACTCTTGCGCCTTCGCCCATGTACTGGCTTGTCACATTCTTTGTGGTGATCTCAACACTCATACCATATTTTTCATACTCAGCAATTCAGATGAGGTTCTTTCCCATGTTTCATGAAATTGTCCAATGGATAAGGTATGAAGGGAAGACGAAGGATCCCGAATATTGTCACATGGTGCGGCAGAGATCGTTGCGGCCAACAACCGTCGGATCAACGGCACGGCTGGCAGCCATGGCTAACGACAGGCGAGACAGAACAGCGATTAACCGTAGATAA | 2229 | 0.4365 | MGKRKGSPLNHEQVIGSEPDNINESSNGKASIKGFNFIDERIMNGNWVNEPHADVIRRFFRLLAICHTAIPEMDEDTGNVSYEAESPDEAAFVIAAREIGFEFCKRTQTSVSTFELDPVSAKKVERVYKLLNVLEFNSSRKRMSVIVEDEEGKIFLLCKGADSVMFERLAKNGREFQDKTMEHVHDYADAGLRTLILAYRELDAEEYKEFRDKFSKAKNLVCADQERQIEKISNKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLESPEIKALEKDGDKLAIIKASRQSVLQQISEGAAQVTAYRGSSQQAFALIIDGKSLVYALDDNIKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLDRLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGEPAYNDWLLSIYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILAWMLNGFISAILIFFFCTKAMELQAFDSEGRTAGRDILGATMYTCVVWVVNLQIALAISYFTMIQHIFIWGSIAFWYIFLLAYGAMSPHFSTNAYEVFAETLAPSPMYWLVTFFVVISTLIPYFSYSAIQMRFFPMFHEIVQWIRYEGKTKDPEYCHMVRQRSLRPTTVGSTARLAAMANDRRDRTAINRR | 742 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc620g00003 | 742 | Gene3D | - | 244 | 448 | IPR023214 | - | |
Stsc620g00003 | 742 | NCBIfam | phospholipid-translocating P-type ATPase | 26 | 693 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
Stsc620g00003 | 742 | FunFam | Phospholipid-transporting ATPase | 85 | 243 | - | - | |
Stsc620g00003 | 742 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Stsc620g00003 | 742 | SUPERFAMILY | HAD-like | 236 | 456 | IPR036412 | - | |
Stsc620g00003 | 742 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 457 | 686 | IPR023298 | - | |
Stsc620g00003 | 742 | FunFam | Phospholipid-transporting ATPase | 243 | 448 | - | - | |
Stsc620g00003 | 742 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 34 | 206 | IPR023299 | GO:0000166 | |
Stsc620g00003 | 742 | NCBIfam | HAD-IC family P-type ATPase | 379 | 490 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Stsc620g00003 | 742 | Pfam | Cation transport ATPase (P-type) | 76 | 169 | - | - | |
Stsc620g00003 | 742 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 29 | 697 | - | - | |
Stsc620g00003 | 742 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 436 | 686 | IPR032630 | - | |
Stsc620g00003 | 742 | Gene3D | - | 108 | 243 | IPR023299 | GO:0000166 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc620g00003 | Stsc-Chr620 | 23269 | 29042 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc620g00003 | 1 | 734 | Primary Pumps ATPases | AT1G68710 | 70.980 | 0.0 | 1136 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc620g00003 | K01530 | - | gmx:100781421 | 1274.23 |