Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc62039g00001 ATGGATCCACCAAAGAAATCTAACAAGATCAAGGACATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATTGCAAACTCTTCAAAATCAAGTAACAACAACAACAACAACAATAATCATGGCGGAAGTAAAGGCATTAAGTTTCTGAAAAGGACACTTTCTTTGTCTGATCGCGACAAAGAATCATCGAGCAATGCGGTTCCAAAAGGATACTTAGCTGTTTGTGTTGGACTAGAGCTCAAGCGATTCGTCATACCGACCGAATATCTTGGTCATCAAGCCTTTCACATGTTGCTAAGAGAAGCTGAAGAAGAGTTTGGGTTCGAGCAGACCGGAGTTCTGAGGATTCCCTGTGAAGTATCTGTGTTTGAGAATGTCCTGAAGATGGTGGAGGAAAAGGACGAGTTTTCGGCTCACAACTGCGGATTATTCAGTGTTGAAAAGATGATGATGGGGTACTGCTCCTTCAATCAGCTTACTTATTCTCATCACCCTCAGAGTCCTATGTGCAGATAA 522 0.4215 MDPPKKSNKIKDIVRLQQILKKWRRIANSSKSSNNNNNNNNHGGSKGIKFLKRTLSLSDRDKESSSNAVPKGYLAVCVGLELKRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFENVLKMVEEKDEFSAHNCGLFSVEKMMMGYCSFNQLTYSHHPQSPMCR 173
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc62039g00001 173 Pfam Auxin responsive protein 22 132 IPR003676 GO:0009733
Stsc62039g00001 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 128 IPR003676 GO:0009733
Stsc62039g00001 173 MobiDBLite consensus disorder prediction 27 45 - -
Stsc62039g00001 173 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc62039g00001 Stsc-Chr62039 3480 4411 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc62039g00001 5 173 Calmodulin-binding Proteins AT2G24400 56.684 3.99e-60 183
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc62039g00001 K14488 - pvu:PHAVU_009G103800g 242.276