LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc62021g00002	ATGATTTCAGCCGGTCACATCTCCGGCGGTCACCTGAACCCTGCCGTGACGCTTGGGCTCCTCGTGGGCGGGCACATCACGGTGGTCCGATCGGTCCTTTATTGGATAGATCAGTTGGTAGCATCTGCAGCTGCTTCTTACCTTCTTTGCTACCTTTCCGGGGGAATGGCAATTCCAGTTCATACTCTAGCAAGTGGAGTTGGGTATAGTCAAGGAGTAATTTGGGAGATTGTGTTGACTTTCTCATTGTTATTTACGGTCTATGGAACTATGGTTGACCCCAAAAAAGGAGTAGCTACTGGGCATGGGCCCACAATAATTGGGTTTGTAGTTGGGGCCAATATCCTCGCTGGTGGGGCCTTCTCTGCGGCCTCAATGAACCCAGCAAGGTCTTTTGGGCCCGCCTTGGTCATGGGTAACTGGACCGGTCAATGGGTTTATTGGGTTGGGCCTCTCATTGGTGGAGGCCTTGCCGGATTATCTATGAACATTTTTTCATTGACCGTACCCATAATCTACTCTATCCTCATGAAGAAAATTAATAAGGAACTTGTTTTTTACTCATTCTATGCTGTATTTTATTTCGGTAATGCTAGACTTATTTTGTCCAATCAAATCTAA	621	0.4686	MISAGHISGGHLNPAVTLGLLVGGHITVVRSVLYWIDQLVASAAASYLLCYLSGGMAIPVHTLASGVGYSQGVIWEIVLTFSLLFTVYGTMVDPKKGVATGHGPTIIGFVVGANILAGGAFSAASMNPARSFGPALVMGNWTGQWVYWVGPLIGGGLAGLSMNIFSLTVPIIYSILMKKINKELVFYSFYAVFYFGNARLILSNQI	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc62021g00002	206	SUPERFAMILY	Aquaporin-like	3	167	IPR023271	-
	Stsc62021g00002	206	PRINTS	Major intrinsic protein family signature	108	130	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Stsc62021g00002	206	PRINTS	Major intrinsic protein family signature	145	165	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Stsc62021g00002	206	PRINTS	Major intrinsic protein family signature	30	49	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Stsc62021g00002	206	PRINTS	Major intrinsic protein family signature	75	93	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Stsc62021g00002	206	PANTHER	AQUAPORIN-8	4	165	IPR034294	-
	Stsc62021g00002	206	ProSitePatterns	MIP family signature.	11	19	IPR022357	-
	Stsc62021g00002	206	Gene3D	Glycerol uptake facilitator protein.	1	169	IPR023271	-
	Stsc62021g00002	206	Pfam	Major intrinsic protein	3	160	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc62021g00002	Stsc-Chr62021	2995	4793	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc62021g00002	1	160	Major Intrinsic Protein MIP	AT2G25810	80.625	8.65e-90	262

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc62021g00002	K09873		-	gmx:100793258	283.108