Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61983g00001 ATGGAGAATAATAACGAGCTTTCGAAGGCAATAATAATGGAGCAAGAACTCATGAGAGGGCGTGACGTGGCAAACCAGTTACTTGAAGTAGTTGTTGATAATAATAATAATAATAAATCAAATAGCAGCAGAAAAGAAGAAGAAATTAGTGAAAGGTCAATGGTGATGCCTTTTGCTGAAGATGCTGTGCGCAAGGTTCTGAGATCGTTCACTAACACCCTCTTGCTTTTGAACAGCGATACCCAACATAACTCTTTTGCTATTCATCATCATCAAAGTTGCAACAGCAGCAACAACAAGAAGAAGAGGAATAGTTTCAGCAATAAAAGTCAAAGAGGGTGCCATAAGAGAAAATCAGTTGCACCAACCTGGCAGAGTGACAGCTCAATTCTGTGTGAGGATGGCCATGCATTGAGAAAATACGGACAGAAGAAGACTGTGAATTCCAACTACCTCAGGAGCTACTACAAATGCAGTTACAAGAATGAGCAAGATTGCAAAGCCATCAAACATGTTCAAAGAATCCAAGAAGATCCTCCATTGTACCGTACAAGCTATTATGGCCATCACACTTGCAAAACCTCTCTCATCAATTACCCTTACACAAAACTAGAACAACCCGCTTCTTCTTTTGAATCTTCTACGCTACTATGCTTCAGTAGTAGTAGTGATCACAATACCAATAATACTACCCTTCCAATAATAACAAAACAAGAAGCACAACCTTTTCCTTCATCATCATTTTCATCTTCATCAACAAAACAAGAGCCAATGGAAGTGGTTTCTGATGACCCTATTGACCACAAGAAATCTTCGTTGTCAAATAATTACTACGATCTCCTAAGTGATTATGAACTTTATTTCAATTATTAG 873 0.3826 MENNNELSKAIIMEQELMRGRDVANQLLEVVVDNNNNNKSNSSRKEEEISERSMVMPFAEDAVRKVLRSFTNTLLLLNSDTQHNSFAIHHHQSCNSSNNKKKRNSFSNKSQRGCHKRKSVAPTWQSDSSILCEDGHALRKYGQKKTVNSNYLRSYYKCSYKNEQDCKAIKHVQRIQEDPPLYRTSYYGHHTCKTSLINYPYTKLEQPASSFESSTLLCFSSSSDHNTNNTTLPIITKQEAQPFPSSSFSSSSTKQEPMEVVSDDPIDHKKSSLSNNYYDLLSDYELYFNY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61983g00001 290 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61983g00001 290 Gene3D WRKY domain 123 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc61983g00001 290 MobiDBLite consensus disorder prediction 241 258 - -
Stsc61983g00001 290 MobiDBLite consensus disorder prediction 241 267 - -
Stsc61983g00001 290 MobiDBLite consensus disorder prediction 91 120 - -
Stsc61983g00001 290 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61983g00001 290 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc61983g00001 290 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61983g00001 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 224 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61983g00001 Stsc-Chr61983 5260 8127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61983g00001 61 224 WRKY Transcription Factor Family AT5G22570 32.749 7.31e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc61983g00001 WRKY 1.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61983g00001 - - adu:110273813 323.939