Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61968g00002 ATGGATGTTTCGTCTGGAGGCATATTAATGGCTATCTACAAGCATTGGGATGTCCCTGCTAAGCCAAGTGTGGAGACTAGTAACTTGGTAGTATTGAACCAAAGCTCCACCAGAAACATACATGCAAAGGGAGAATCTTCTGCAATGCAGACATCCTTAGCTCCCTTTACTTCTTCAAAAGCATGTTTGGGGAATAATCGGGTGGGTGATCAAAGAAAGTTAGATGAAATTTCTACAATTGACTGTTGTACGCATCCTGGCCAAGAGTTTCCAAAAGCTGGGAATCGTTTGGATTCAGCAACAACTATAGAAAGTCCTTGTGCTGCTTCAGAAGGATCAGCTGATACCACACAAGTTAGGCCAGGCATTGAGAATGTTCAAATGAATGGGCTTTACGATCCCAATCGATCTGATGAATCCTTGAATCAGTCAGGAATACCAGAAAAACATCATCCAGTTGGTGACAGTTCTTTGGTATCATCTAGGTTAGACGTGGAACATAAGAGGAAATTAAGATCTGTGGATGATAGTTGTGCCCAGCTGCCTGAAGATAAGGATACTTCTGATGTGCCTTTTGGAATAGACTACACTAACTATTACAGCTTCGCGCGAACAGCCTCATTAATTGCACAGGAGTTGATGAGTAAGTCACCTGAAAAGATAAATAAGAATATTGTATTCACCGAAGAAGACATAATTTCAGACCAAGTCAAGGCTATTATGAAGAAATCTACAAGCTTCTGCTGGCCAAGTATTCAAAACACGCATGCAGCTGCCCAAAAAGAAAATTGTGGGTGGTGCTTTTCTTGCAAAGTTGCAAATGATGATAGGGATTGCTTGTTTAATTCTGTCATGAAGCCTGTTTGGGAAGTGTCTGAAAGTACTTTCGGTGGGCTTCAGCCCAGGAAGATCCAGAATGGACATCTTAGGGATATCATCTGTCATATTCTCTCGCTTGAGGATCGATTGCGCGGGCTTTTGTTGGGTCCATGGTTGAATTTACATCAAACTGATCTTTGGCATAAGGAGCTTATGAAGACTGGTGATCTTCTTCCTGCTAAAAAATTATTGCTTATTTTGGAATCAAATTTGCGGCCTTTTGCTTTTGCAGCAGATTGGTTAAAGCATGTGGATTCTATTGGTACCATGGGATCAGCTATTCATTTTGTGGCCAGTACACGCAACTCATCAAGGTATGGTATTGGTAGGAAAAGGGCTAGGTTTTCTGATGCTGAGCCCAATTCATCTTCAAACAATGCAAGTGGTTTGACAATGTATTGGTGGAGAGGTGGTAAGCTTTCCCGACAGTTGTTTAATTGCAAGAGTTTGCCCCGCTCGTTGGTTACCAAGGCTGCTAGACAAGCGGGGTGCTCAAAGGTACCAGGCATTTTGTATCCTGAGAATTCAGATTTTGCAAAGCGAAGCAAATGCATTGCATGGCGTGCCGCTGTTGAGATGTCAACAAGTGTTGAGCAGCTTGCTGTACAGGTCAGAGAGCTTTACTCAAACATCAAGTGGCGTGATATTGAAAATAGCCATCCTCAATGTGTCTTAGACAAGGAATCTAGAAAAGCAGTTAGACTGTTCAAGAAAGCAATTGTACGCAGGAAGTCCACTGAAGGGAAATCTGTGAAGTACCTTATTGATTTTGGGAAGAGAAGGGCTATTCCTGATGTTGTTACCAAACATGGTTCTCTGTTGGAAGAACCCTCCAGTGAGAGAAAAAAATATTGGCTGGAAGAATCTTATTTACCGATGCATCTTTTAAAGAATTTTGAGGAGAAAAGAATCATTCGGAAGTCCGATGTAAAGAAACTTGGGAAAACTATTGAGATTGGTAGAGTTAATAGGAAGGTTCCTGAACAAAGGGGATTTCCGTATTTGTTTTCTAAACTGGAAAGATCTGATTGTCATCAGTGTGGGCATTGCAACAAAGATGTTCCTATCAGGGATGCTGTGAGCTGCCAGTATTGCGAAGGATATTTTCATAAGAAGCATGTAAGGAAATGTAGTGGCACAAAGGCTACTAAATGCACATATTCATGTCACAGATGCGAGGGTGGCATGCGTCCAAAGACTAAAACTAATTCAAAGAGAAAGAGGGTTGACTCTAAACAGCAGAAGGTTCAATCACAGACAAGTAAAAGTACCCCGTCAGTTAGTAAGTCAGTGAGCCTTAAAGGCAATAAAAGGGCTTTGAGTAAGGCACGGAAGGCAAAATCTCGAACTAATAAGAAGATCACACCAAGTGTACCACTTCGTCGTTCTACTAGGAAGGCCAAATCCTTGTACATGTACAGTCAAATGAATGGAGGGCGGAAAAAGGGAATTCAAGGTAAGAAGAAAGCTGGACGTAAAAAGGGGAAGCAAAATAAATCAAAGGTAAACAATCAGAAGCCCAAAGAAACTGCTGCTCAGCCTGAGAAGAGTATGCCACCTACTATTTCTAAGAAAAGAGCAAACGTTAATAGCAGCTACTGGCATAATGGTCTTTGGTTGTCTAGAAAGCCAAATGATGAACGAGTAGCGCTGTTTCGGGAAAAAAAGCATGTTTTCTCCTCTGAGGGTTTTTCTGCTGCCAGTGATATTCCTAAATGCCACATTTGTTCTGGAGATGGACCTGCATTAGATTATATTGCTTGTGACAATTGTGGAGATTGGTATCATGGGGATGCTTTTGGGCTCACTGTAGAGAATTCCAGACAATTAATTGGATTTAGGTGTCATGTTTGTCTTCAGAGGGATGCTCCGATCTGCCCCCATATGACGTGTAAAGCACTGTCTCTCGCTGGAAACAGCGCTAATGAGCATGCTGAGGAATTATTAAATCCTGTATCTCTCCAGTCTCCGAGTGAGGTTTGA 2862 0.4186 MDVSSGGILMAIYKHWDVPAKPSVETSNLVVLNQSSTRNIHAKGESSAMQTSLAPFTSSKACLGNNRVGDQRKLDEISTIDCCTHPGQEFPKAGNRLDSATTIESPCAASEGSADTTQVRPGIENVQMNGLYDPNRSDESLNQSGIPEKHHPVGDSSLVSSRLDVEHKRKLRSVDDSCAQLPEDKDTSDVPFGIDYTNYYSFARTASLIAQELMSKSPEKINKNIVFTEEDIISDQVKAIMKKSTSFCWPSIQNTHAAAQKENCGWCFSCKVANDDRDCLFNSVMKPVWEVSESTFGGLQPRKIQNGHLRDIICHILSLEDRLRGLLLGPWLNLHQTDLWHKELMKTGDLLPAKKLLLILESNLRPFAFAADWLKHVDSIGTMGSAIHFVASTRNSSRYGIGRKRARFSDAEPNSSSNNASGLTMYWWRGGKLSRQLFNCKSLPRSLVTKAARQAGCSKVPGILYPENSDFAKRSKCIAWRAAVEMSTSVEQLAVQVRELYSNIKWRDIENSHPQCVLDKESRKAVRLFKKAIVRRKSTEGKSVKYLIDFGKRRAIPDVVTKHGSLLEEPSSERKKYWLEESYLPMHLLKNFEEKRIIRKSDVKKLGKTIEIGRVNRKVPEQRGFPYLFSKLERSDCHQCGHCNKDVPIRDAVSCQYCEGYFHKKHVRKCSGTKATKCTYSCHRCEGGMRPKTKTNSKRKRVDSKQQKVQSQTSKSTPSVSKSVSLKGNKRALSKARKAKSRTNKKITPSVPLRRSTRKAKSLYMYSQMNGGRKKGIQGKKKAGRKKGKQNKSKVNNQKPKETAAQPEKSMPPTISKKRANVNSSYWHNGLWLSRKPNDERVALFREKKHVFSSEGFSAASDIPKCHICSGDGPALDYIACDNCGDWYHGDAFGLTVENSRQLIGFRCHVCLQRDAPICPHMTCKALSLAGNSANEHAEELLNPVSLQSPSEV 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61968g00002 953 MobiDBLite consensus disorder prediction 131 158 - -
Stsc61968g00002 953 MobiDBLite consensus disorder prediction 689 820 - -
Stsc61968g00002 953 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 857 918 IPR013083 -
Stsc61968g00002 953 MobiDBLite consensus disorder prediction 775 794 - -
Stsc61968g00002 953 MobiDBLite consensus disorder prediction 707 728 - -
Stsc61968g00002 953 PANTHER PHD FINGER FAMILY PROTEIN 7 917 - -
Stsc61968g00002 953 SUPERFAMILY FYVE/PHD zinc finger 854 914 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61968g00002 Stsc-Chr61968 8182 14039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61968g00002 6 922 PHD Transcription Factor Family AT5G12400 40.192 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61968g00002 - - gmx:100800973 1234.94