Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61966g00002 ATGATCATGGACTTCCAAGTCGTCGTCCTCGCCGGTGGCGTCTCCAAGAAACTCCTCCCTCTCGTTTCCAAGGAGATTCCGAACGCCTTGCTTCCGGTGGCGAATCGGCCTGTTATCTCTTATGTGCTCGAGCTTTTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTAGTCGAAGGCGAAGATGCCGCTCTTCATGTTGGGGGCTGGATATCAGCGGCTTATGCTGATCGCCTCCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTAGGAACTGCTGGTGCTATTCGGGCGATTGCACACCACCTAACTGCTAAGGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCAGTTGCAGCTACTCATAGGCGGCATGATGCTGTTGTCACTGCTATGCTTTGTTCTGCTCCTGTAAGTGGGCCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATAACTTGATAGGGTTGGATCCCACACAACAGTTCTTACTTCACATAGCAACAGGAGCTGAAGTTGAAAAAGATCTCCGAGTTCAGAAGAGCATACTCCGTGCAGCTGGTCAGAAATCAGAGCTGATCTAA 624 0.5016 MIMDFQVVVLAGGVSKKLLPLVSKEIPNALLPVANRPVISYVLELLELSNLKDLIVVVEGEDAALHVGGWISAAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESGSSGGKDKTKKPGRYNLIGLDPTQQFLLHIATGAEVEKDLRVQKSILRAAGQKSELI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61966g00002 207 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 202 - -
Stsc61966g00002 207 Pfam Nucleotidyl transferase 8 149 IPR005835 GO:0009058
Stsc61966g00002 207 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 184 IPR029044 -
Stsc61966g00002 207 MobiDBLite consensus disorder prediction 143 164 - -
Stsc61966g00002 207 SUPERFAMILY Nucleotide-diphospho-sugar transferases 5 151 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61966g00002 Stsc-Chr61966 990 3302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61966g00002 5 179 Eukaryotic Initiation Factors Gene Family AT2G34970 26.596 2.02e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61966g00002 K03241 - gmx:100783346 323.168