Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61966g00001 ATGATCATGGACTTCCAAGTCGTCGTCCTCGCCGGTGGCGTCTCCAAGAAACTCCTCCCTCTCGTTTCCAAGGAGATTCCGAACGCCTTGCTTCCGGTGGCGAATCGGCCTGTTATCTCTTATGTGCTCGAGCTTTTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTAGTCGAAGGCGAAGATGCCGCTCTTCATGTTGGGGGCTGGATATCAGCGGCTTATGCTGATCGCCTCCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTAGGAACTGCTGGTGCTATTCGGGCGATTGCACACCACCTAACTGCTAAGGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCAGTTGCAGCTACTCATAGGCGGCATGATGCTGTTGTCACTGCTATGCTTTGTTCTGCTCCTGTAAGTGGGCCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATAACTTGATAGGGTTGGATCCCACACAACAGTTCTTACTTCACATAGCAACAGGAGCTGAAGTTGAAAAAGATCTCCGAGTTCAGAAGAGCATACTCCGTGCAGCTGGTCAGATAGAAATCAGAGCTGATCTAATGGATGCTCACTTGTATGCATTCAAAAGTTCTACAAGAAGTTTTAGATCAAAAGGGTACATTTCATAG 696 0.4842 MIMDFQVVVLAGGVSKKLLPLVSKEIPNALLPVANRPVISYVLELLELSNLKDLIVVVEGEDAALHVGGWISAAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESGSSGGKDKTKKPGRYNLIGLDPTQQFLLHIATGAEVEKDLRVQKSILRAAGQIEIRADLMDAHLYAFKSSTRSFRSKGYIS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61966g00001 231 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 227 IPR029044 -
Stsc61966g00001 231 CDD eIF-2B_gamma_N 5 218 - -
Stsc61966g00001 231 SUPERFAMILY Nucleotide-diphospho-sugar transferases 5 151 IPR029044 -
Stsc61966g00001 231 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 221 - -
Stsc61966g00001 231 MobiDBLite consensus disorder prediction 143 164 - -
Stsc61966g00001 231 Pfam Nucleotidyl transferase 8 149 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61966g00001 Stsc-Chr61966 990 3302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61966g00001 5 214 Eukaryotic Initiation Factors Gene Family AT2G34970 24.444 1.46e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61966g00001 K03241 - gmx:100783346 355.525