Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61918g00002 ATGGGGAATTGCATTTCAGAAACTTCTGATATCACTACGCCATACCCAAATAATCATATAGGTGCTGCAAAAGATGGTTATAATAGAGAAAGAAGCAGATTATTACTGCTACCACCACCACCAATACAACGAGATGATGATGATTATTATGGTAAAGATGATGATAAGATTTTTCTATCAACTCCACCAAAATCTGAAGCAGACACACTAATCTTTTCATCCCCTGATTTAAAACCCTTCACATTAAATGACCTCAAGAATGTTACTGGAAACTTTAGTCCTGAGAATCTAATAGGAGAAGGTGGATTTGGTTATGTCTATAAGGGATGGGTTAATGCTCATACAATTAAGCTTGTCTCTGGAACTGGAACTGTTCCTGTAGCTGTAAAGAAGCTTAAATCTCAAGGTTTTCAAGGTCATAAAGAGTGGTTGAGTGAATTGAATCATTTGGGGCAACTTCATCATCCAAATCTGGTGAAACTTATTGGGTACTGCCTTGAAGGGGATAACAGGCTTCTGGTGTATGAGTACATGACGAAAGGAAGCTTGGAAAATCACCTATTTAATAAGGGGGATGAAACGCTTTCTTGGGGAACAAGAATCAAAGTTGCTATTGGTGCTGCAAGAGGACTAACCTTTCTACATGAATCTGAGCATCAAGTCATCTACCGAGACTTCAAGCCTCCTAATATCTTATTAGATTCGGAATTTAATGCAAAACTTACTGACTTTGGATTGGCGAAATCAGGGCCAATTGGTGATCTAAGTCATGTTTCTACTACTCAGGTCTTGGGCACCAGAGGTTATGCTGCTCCTGAATATATCCTTACTGGTCGGCTAACTACAAAATGCGATGTATATAGTTTTGGAGTGGTGTTGTTAGAACTACTAACAGGGCGGCATGCAATAGAGGTAACAAAATCAGGGGTGGAAGATAATCTTGTGGAATGGGCAAAACCCTATTTGGGTGATAGGAAGAAGTTGTTCAGGATCATGGACACTAAGTTAGCAGGAAAATACTCAAAAAGGGCAGCTTATATAGTTTCTCTTCTTGCTTTGCAATGCATTAGTGATGCCAACAACAGGCCTAAGATGCATGATATTTTGTCTACTTTAGAAAGGCTTCAACTCACTAACAAAAACCACTCACATAGATCCGTCTCATCAAGCCCAACGTTACACAGCGTCCCTAATCAATTGGTTTTATCCCCTTTGAGACATAATAATAGTAGTAATAATAATAATGATGATAATGATAACAACAATGGTAATTATTACTCGTATTATTATTCACCATATAACACTACTGGGAGGTCACCCTCACCCCTGTTGCAACCCACGCATCATTATTAA 1353 0.3865 MGNCISETSDITTPYPNNHIGAAKDGYNRERSRLLLLPPPPIQRDDDDYYGKDDDKIFLSTPPKSEADTLIFSSPDLKPFTLNDLKNVTGNFSPENLIGEGGFGYVYKGWVNAHTIKLVSGTGTVPVAVKKLKSQGFQGHKEWLSELNHLGQLHHPNLVKLIGYCLEGDNRLLVYEYMTKGSLENHLFNKGDETLSWGTRIKVAIGAARGLTFLHESEHQVIYRDFKPPNILLDSEFNAKLTDFGLAKSGPIGDLSHVSTTQVLGTRGYAAPEYILTGRLTTKCDVYSFGVVLLELLTGRHAIEVTKSGVEDNLVEWAKPYLGDRKKLFRIMDTKLAGKYSKRAAYIVSLLALQCISDANNRPKMHDILSTLERLQLTNKNHSHRSVSSSPTLHSVPNQLVLSPLRHNNSSNNNNDDNDNNNGNYYSYYYSPYNTTGRSPSPLLQPTHHY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61918g00002 450 Pfam Protein tyrosine and serine/threonine kinase 96 370 IPR001245 GO:0004672|GO:0006468
Stsc61918g00002 450 MobiDBLite consensus disorder prediction 403 431 - -
Stsc61918g00002 450 Gene3D Phosphorylase Kinase; domain 1 57 177 - -
Stsc61918g00002 450 ProSiteProfiles Protein kinase domain profile. 92 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61918g00002 450 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
Stsc61918g00002 450 PANTHER OS01G0588500 PROTEIN-RELATED 65 376 - -
Stsc61918g00002 450 FunFam Serine/threonine-protein kinase BIK1 59 177 - -
Stsc61918g00002 450 Gene3D Transferase(Phosphotransferase) domain 1 178 395 - -
Stsc61918g00002 450 ProSitePatterns Protein kinases ATP-binding region signature. 98 131 IPR017441 GO:0005524
Stsc61918g00002 450 SUPERFAMILY Protein kinase-like (PK-like) 69 374 IPR011009 -
Stsc61918g00002 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Stsc61918g00002 450 CDD STKc_IRAK 98 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61918g00002 Stsc-Chr61918 7343 9473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61918g00002 42 372 Glycoside Hydrolase AT3G07070 46.132 1.57e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc61918g00002 PK_Tyr_Ser-Thr 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61918g00002 - - ahf:112775113 641.343