Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61886g00001 ATGTCAAGGTTTAGCCCTGGTGATCCAAACATAAGTTACAAAGGTCAAGCAGGACCTCGTGTTGGAGCAATTGAATTAAACAATAATGTGAATTATTTATCCCAAGTTGGTTCTGCTGTTTACTCCAAAGAAGTGTTCTTATATGAATCAAGCTCAGGAAAACAAGCTGATTTCACAACACATTTCACCTTTCTCATTGACACTCAAGGTCAATCAAAATATGGTGCTGGTCTTGCCTTCTTCCTTGCACCTTCTGGATTCCAAATCCCACTGAACTCCGCCGGCGGCTTCCTTGGCCTATATAACACAACCACCAGCGACTCCTCCCGGAACCAGATTGTTCATGTTGAGTTTGATTCTTACTCCAATCCAGAATGGGATCCCAAAATGGAGCATGTTGGCATCAACATCAATTCAATTTCTTCTGCAAATTACACTGCTTGGAATGCTAGCAGGCATAGTGATGACACTGCTGATGTGTGGATTGCGTACAATTCAACAAACAAGATTCTTAGTGTGTCTTGGAAATACCACACAACATCTACCTCTCAAGAGAATACTACCCTTTCTCATCAAATTGATTTGATCAAAGTCTTGCCTCAACGTGTTACGGTTGGATTTTCTGCAGCCACTGGTATCTACAGGGAACGGCATATCGTTCAGTCATGGGAGTTCAAGTCCAGTTTGGATGCAGAGCAGGGTAATGCAAAGAATTCGAAACAGATATGGAAAGTGGTGGTTGCATCAATTGCAGCAGCTGTTTTGATTGTAGCAATTATTTCAACATATGCAATAATCAGAAGATGGAAGAGAAAGAAAAGGGATGCTATAATAATTGAGAGGATTAACTCAATTGAAGATCTTGAAAGAGGAGCTGGACCAAGAAGGTTCTTTTATGAAGATGTTGTATCGGCCACCAATAACTTCTCTGCAAACAGGAAGCTCGGTCAAGGTGGATTTGGAGCGGTTTATAGAGGCTACTTTTCTGATTTAGATTTGGTTGTTGCTGTTAAGAAGATATCAAGCGGATCAAGACAGGGGAAAAGAGAGTACATAACTGAAGTCAAAGTCATCAGCAGGTTAAGGCATCGGAATCTTGTGCAGCTCATAGGTTGGTGCCATGATCGAG 1129 0.4154 MSRFSPGDPNISYKGQAGPRVGAIELNNNVNYLSQVGSAVYSKEVFLYESSSGKQADFTTHFTFLIDTQGQSKYGAGLAFFLAPSGFQIPLNSAGGFLGLYNTTTSDSSRNQIVHVEFDSYSNPEWDPKMEHVGININSISSANYTAWNASRHSDDTADVWIAYNSTNKILSVSWKYHTTSTSQENTTLSHQIDLIKVLPQRVTVGFSAATGIYRERHIVQSWEFKSSLDAEQGNAKNSKQIWKVVVASIAAAVLIVAIISTYAIIRRWKRKKRDAIIIERINSIEDLERGAGPRRFFYEDVVSATNNFSANRKLGQGGFGAVYRGYFSDLDLVVAVKKISSGSRQGKREYITEVKVISRLRHRNLVQLIGWCHDR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61886g00001 376 CDD lectin_legume_LecRK_Arcelin_ConA 4 229 IPR001220 GO:0030246
Stsc61886g00001 376 Gene3D - 1 254 - -
Stsc61886g00001 376 Pfam Legume lectin domain 3 236 IPR001220 GO:0030246
Stsc61886g00001 376 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 232 IPR013320 -
Stsc61886g00001 376 ProSitePatterns Legume lectins alpha-chain signature. 199 208 IPR000985 -
Stsc61886g00001 376 ProSitePatterns Protein kinases ATP-binding region signature. 315 339 IPR017441 GO:0005524
Stsc61886g00001 376 Gene3D Phosphorylase Kinase; domain 1 294 376 - -
Stsc61886g00001 376 SUPERFAMILY Protein kinase-like (PK-like) 293 374 IPR011009 -
Stsc61886g00001 376 PANTHER - 28 374 - -
Stsc61886g00001 376 ProSiteProfiles Protein kinase domain profile. 309 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61886g00001 376 Pfam Protein kinase domain 310 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61886g00001 376 FunFam L-type lectin-domain containing receptor kinase IX.1 294 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61886g00001 Stsc-Chr61886 68 1196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61886g00001 1 376 Receptor kinase-like Gene Family AT5G10530 50.656 3.01e-126 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc61886g00001 Lectin_legB 1.3e-64 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61886g00001 - - adu:107487060 601.668