Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61883g00002 ATGCAGGAGAGAGGTCTACTAGCACCCCGAAAATCAAGGCATCGCTTAACTCCTGGAATAGTAAAGTTTGATGCATTTCATGTTCTACTTGAAGGTGATGAGGGAATGATAGTACTAGAGCTTGCAGGAAAAATTCAGTCTTCTCCAAATCTCATGTCCTCAAAATTTGGCATGGTTTTAGGGTTTCTGGAATTGAGTTCCATCTTGGAGCCTGGTAGCAGGCAGCCCAAAACTGACAAGGTTGCCATCTCAAGTGATGTTGTCCGAGTGGTAAACCATTCAAGAGATGAAGCAGAGAAACTGAAGAAAATGGACGATGAAATGCTTCAAAAAATTAAAGAGCTCAAGGTGGGTGACTTTCTGTTATTGTTAGCAAGCTAA 381 0.4173 MQERGLLAPRKSRHRLTPGIVKFDAFHVLLEGDEGMIVLELAGKIQSSPNLMSSKFGMVLGFLELSSILEPGSRQPKTDKVAISSDVVRVVNHSRDEAEKLKKMDDEMLQKIKELKVGDFLLLLAS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61883g00002 126 PANTHER BHLH TRANSCRIPTION FACTOR 62 117 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61883g00002 Stsc-Chr61883 11796 12245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61883g00002 1 48 Homeobox Transcription Factor Family AT1G28420 77.551 4.42e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61883g00002 - - aip:107613798 91.6633