Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61869g00002 ATGGACTTTGTAAGTTTCACAATACTCTTTGTATTGGCATGTATCACCATACGTGCACTCCGTTCACACTTTACAAAATCCACAAAACCTAACTACAAGCTTCCACCGGGACCTTCTCGACTTCCGATAATCGGAAACCTCCTCGAAATGGGGGAGAAACCCCACTTGTCTTTGTCCAAGCTCGCAAAGACTCATGGTCCTATCATGAGTCTGAAGCTTGGACAAAAGATAACAGTAGTAGTCTCTTCCGTCGAAATGGCAAAAGAGGTACTTCTTAGCTACGACCACCTCTTATCAAACCGGCCTATTCCGCAATCAGTGTCGGTTCTCAACCACGAACACTACAGTTTTGCCTTCATTCCCATTTCCCCTCTTTGGCGCGAAATGAGAAAGTTATGCAACACTCAGTTACTATCCCACAAGAATCTTGATGATAGCCAACATGTTAGGCGTCACAAAATGCAAGAACTCCTCAGTGATGTCCACCGTAGCAGCCAAATCGGCAAAGCTATAGATATTGGAACACTAGGGTTCAAGGCTACCTTGAATCTGTTATCAAACACCATTTTCTCCATAGATTTGGTTGAATCTACAGATGCAGCAGGAGAGTTCAAGGATGTGGTTACTCACATCACGAATCTTGTTGGAACACCAAACTTGGCTGATTTCTTCCCCGTGTTGAAGAAAATTGACCCACAAGGAATCAACCGAAGACAGGCTAAGAATGTAAGAAAGGTTCTTGATATCTTTGACCGTTTGATTAACCAACGGTTGAAGCTCAGAGAAGGAAATGGTTTTGATAGAAAAAATGACATGTTGGATGTCCTACTCACTATTTCTAAGGACAACAAGTTGATTGATAAAACGGTCATTGAACATTTATTCCATGATATATTCGTTGCGGGAACAGACACAACGGTATCAACCTTAGAATGGGCGATGACTGAGTTAATTCGCAACCCACAAGTTATGGAAAAGGCTAAAAAGGAATTAGGCGAAATAGTTGGCAACAATGGCGTCCCTATTGAGGAGTCAGACATTTCCAAACTACCATACTTACAAGCAGTAATAAAAGAGACGTTACGTCTGCACCCTCCAGTTCCATTCTTGCTGCCACGAAAAGCTAAGAGTGACGTGGACATCGCTGGCTACACCATCCCAAAAGATGCTCAGATCATGGTTAATGTGTGGAACATTGGAAGGGATCCAACACTGTGGGAAAATCCAACATTGTTTTCTCCGGAGAGGTTCATAGGTTCCGATATTGACGTTAAAGGAAGGAACTTTGAACTGGTTCCGTTCGGTGCTGGAAGAAGAATTTGCCCCGGATTACAATTGGCTAATAGAATGTTGTTCTTGATGTTGGGTTCATTGATCAACTCCTTTGATTGGAAGCTTGAAGATGGAATGAGATCGGATGATATAGACATGACTGAGAAATTTGGAATTACTCTACAAAAAGCTCAACCGCTTAAAGTTTTTCCAATCAAGATAACCAACTAA 1503 0.4212 MDFVSFTILFVLACITIRALRSHFTKSTKPNYKLPPGPSRLPIIGNLLEMGEKPHLSLSKLAKTHGPIMSLKLGQKITVVVSSVEMAKEVLLSYDHLLSNRPIPQSVSVLNHEHYSFAFIPISPLWREMRKLCNTQLLSHKNLDDSQHVRRHKMQELLSDVHRSSQIGKAIDIGTLGFKATLNLLSNTIFSIDLVESTDAAGEFKDVVTHITNLVGTPNLADFFPVLKKIDPQGINRRQAKNVRKVLDIFDRLINQRLKLREGNGFDRKNDMLDVLLTISKDNKLIDKTVIEHLFHDIFVAGTDTTVSTLEWAMTELIRNPQVMEKAKKELGEIVGNNGVPIEESDISKLPYLQAVIKETLRLHPPVPFLLPRKAKSDVDIAGYTIPKDAQIMVNVWNIGRDPTLWENPTLFSPERFIGSDIDVKGRNFELVPFGAGRRICPGLQLANRMLFLMLGSLINSFDWKLEDGMRSDDIDMTEKFGITLQKAQPLKVFPIKITN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61869g00002 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 497 - -
Stsc61869g00002 500 Pfam Cytochrome P450 35 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 Gene3D Cytochrome P450 20 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 CDD CYP76-like 62 495 - -
Stsc61869g00002 500 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61869g00002 500 FunFam Cytochrome P450 76C4 26 494 - -
Stsc61869g00002 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61869g00002 Stsc-Chr61869 3489 5304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61869g00002 1 497 Cytochrome P450 AT2G45550 45.614 9.55e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61869g00002 - - gmx:100798291 730.324