Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61842g00002 ATGCACTCTATCAGCAACTTCATGGCTACACCAGCTGACGAAGGACAACTAATAAGCATGTTGATTAAGCTGATGAATGCGCACAAGGCCATGGAAATAGGTGTCCTCACTGGTTGCTCCTTACTTGCCATTGCCCTTGCTCTCCCTTCTCATGGAAAGATTTTGGCTATGGACATTGACCGCAAATATTATGAACTGGGATTGCCAATAATTGAAAAGGCTGGCGTGGCTCACAAGATCGATTTCAAAGAAGGACCAGCTCTTCCTCTTCTTGACAAACTCTTGCAAGATGATAATAATAAGGGGACATTTGATTTTATTTTCGTGGATGCTGACAAGGAGAATTACTTGAACTACCATAAGAGGGTGATTGAACTTGTGAGAGTGGGGGGTTTAATTGCCTACGACAACACCCTATGGAATGGATCTGTGGCGGTCCCACCTGATGCACCTATGGATGAGGTTGTTAAGGCTTTTCGGGGTTTTGTTATGGATTCAATCAAATTATTGCCGCTGATCCAAGGGTTGAGATTTGCCAAGTTTCTGTTGGTGATGGAATTACTTTGTGTCGCCGTATCATTTGATCATTCTTCCTCCGTTTACTGCCATTAA 612 0.433 MHSISNFMATPADEGQLISMLIKLMNAHKAMEIGVLTGCSLLAIALALPSHGKILAMDIDRKYYELGLPIIEKAGVAHKIDFKEGPALPLLDKLLQDDNNKGTFDFIFVDADKENYLNYHKRVIELVRVGGLIAYDNTLWNGSVAVPPDAPMDEVVKAFRGFVMDSIKLLPLIQGLRFAKFLLVMELLCVAVSFDHSSSVYCH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61842g00002 203 PANTHER O-METHYLTRANSFERASE-RELATED 6 166 - -
Stsc61842g00002 203 CDD AdoMet_MTases 32 135 - -
Stsc61842g00002 203 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 163 IPR029063 -
Stsc61842g00002 203 Pfam O-methyltransferase 4 157 IPR002935 GO:0008171
Stsc61842g00002 203 Gene3D Vaccinia Virus protein VP39 2 180 IPR029063 -
Stsc61842g00002 203 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 182 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61842g00002 Stsc-Chr61842 1792 4452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61842g00002 6 170 Monolignol Biosynthesis Gene Families AT4G34050 69.091 4.89e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61842g00002 K00588 - gmx:100795858 242.662