Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61842g00001 ATGGATATGAGAAAGGGAGAAGAGCATCCTGAGAACCAAATCTGTTACCAGAAAGAAAACTCTCACAAAAGTCTTCTTCAAAGCGATGCACTCTATCAGTATATACTTAAGACAAGCGTATACCCAAAAGAGCATGAGAACGTCAAGGAGCTTCGCCAAATGACGGAAAACTTGCCTTGCAACTTCATGGCTACACCAGCTGACGAAGGACAACTAATAAGCATGTTGATTAAGCTGATGAATGCGCACAAGGCCATGGAAATAGGTGTCCTCACTGGTTGCTCCTTACTTGCCATTGCCCTTGCTCTCCCTTCTCATGGAAAGATTTTGGCTATGGACATTGACCGCAAATATTATGAACTGGGATTGCCAATAATTGAAAAGGCTGGCGTGGCTCACAAGATCGATTTCAAAGAAGGACCAGCTCTTCCTCTTCTTGACAAACTCTTGCAAGATGATAATAATAAGGGGACATTTGATTTTATTTTCGTGGATGCTGACAAGGAGAATTACTTGAACTACCATAAGAGGGTGATTGAACTTGTGAGAGTGGGGGGTTTAATTGCCTACGACAACACCCTATGGAATGGATCTGTGGCGGTCCCACCTGATGCACCTATGGATGAGGTTGTTAAGGCTTTTCGGGGTTTTGTTATGGATTCAATCAAATTATTGCCGCTGATCCAAGGGTTGAGATTTGCCAAGTTTCTGTTGGTGATGGAATTACTTTGTGTCGCCGTATCATTTGATCATTCTTCCTCCGTTTACTGCCATTAA 777 0.4286 MDMRKGEEHPENQICYQKENSHKSLLQSDALYQYILKTSVYPKEHENVKELRQMTENLPCNFMATPADEGQLISMLIKLMNAHKAMEIGVLTGCSLLAIALALPSHGKILAMDIDRKYYELGLPIIEKAGVAHKIDFKEGPALPLLDKLLQDDNNKGTFDFIFVDADKENYLNYHKRVIELVRVGGLIAYDNTLWNGSVAVPPDAPMDEVVKAFRGFVMDSIKLLPLIQGLRFAKFLLVMELLCVAVSFDHSSSVYCH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61842g00001 258 CDD AdoMet_MTases 87 190 - -
Stsc61842g00001 258 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 237 IPR002935 GO:0008171
Stsc61842g00001 258 PANTHER O-METHYLTRANSFERASE-RELATED 20 221 - -
Stsc61842g00001 258 Pfam O-methyltransferase 38 212 IPR002935 GO:0008171
Stsc61842g00001 258 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 217 IPR029063 -
Stsc61842g00001 258 Gene3D Vaccinia Virus protein VP39 13 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61842g00001 Stsc-Chr61842 1792 4452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61842g00001 6 225 Monolignol Biosynthesis Gene Families AT4G34050 65.909 4.82e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61842g00001 K00588 - gmx:100795858 314.309