Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61835g00005 ATGATTCAACCTCAAACTCATTTGAATGTAGCGGATAACAGCGGAGCACGTGAACTGATGTGTATTCGAATCCTAGGAGCTAGTAATCGACGATATGCTTATATTGGCGACATTGTTGTTGCTGTAATCAAACAAGCAGTACCAAATACGAACTTAGAAAAATCTGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAACAACTAAAACGTAGCAACGGTATAATAATTCAGTATGATGATAATGCTGCAGTTATAATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATCTTTTGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGATATGGGCGAACGACGGGAATTGA 384 0.3802 MIQPQTHLNVADNSGARELMCIRILGASNRRYAYIGDIVVAVIKQAVPNTNLEKSEVIRAVIVRTCKQLKRSNGIIIQYDDNAAVIIDQEGNPKGTRIFCAIARELRQLNFTKIVSLAPEIWANDGN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61835g00005 127 SUPERFAMILY Ribosomal protein L14 1 121 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 NCBIfam 50S ribosomal protein L14 1 121 IPR005745 GO:0003735|GO:0006412|GO:0015934
Stsc61835g00005 127 Gene3D Ribosomal protein L14 1 122 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Stsc61835g00005 127 Pfam Ribosomal protein L14p/L23e 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc61835g00005 127 FunFam 50S ribosomal protein L14, chloroplastic 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61835g00005 Stsc-Chr61835 11422 12008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61835g00005 8 118 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 35.652 3.33e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61835g00005 K02874 - gmx:3989333 234.187