Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61833g00002 ATGGCTGCTGATTTGCTACTTGAAATCGTGATTGAAAACTTGCGTACTTTTGTTCAGGACGAGCTTGCAACTATTTGGGGTGTCAACTCCCAGATTCAAGAGCTCTCACGGAACCTCGCTGCAATTCATGCTGTGCTCCAAGATGCTGAAGAGAAGCAAATCAGAGATCATGCTGTCAAGCTTTGGCTTCAGAACCTCTCAGATGCAGCACATGTGCTTGATGATATCTTAGATGAATGTTCAATACAATCCAACCGTCTACAAAGTCAGCACTGCTTAACACGTTTTCATCCTATGACCATTATGTCTCGTCGAGACATCGGCAAGAGGATGAAGGAGATGGTTGACAGGTTCCGTCGCATTGATGAAGAAAGAAGAAGGTTTGAATTGCGCGGAAGAGTTCCAGAGACGCAACAAGAAGATGAAGCATGGCGCCAGACATCTTCTGGTACCACTGAGCACCACGTCTATGGAAGGGACCAAGACATACTCAAGATCGTGGAGGTTCTTTCAAGGAGTGCTGATAGCAGTGATGATCTCTCGGTTTATCCAATTGTTGGCATGGGGGGCCTCGGAAAAACAACACTTGCTCGACGGGTTTTCAAAGACAGTAAGGTCATGAAACATTTTGATCTGAGGATTTGGGTTTGTGTTTCCACTGACTTCAATATAATGAAAATTCTACACTCCATTGTGGAATGTGTAAGTGAACAAAACCCAAATCTGTCTACTTTAGAAGCACTGCAAAATAAAGTTCAAGAAATACTGCAAGGCAAAAGGTATTTACTTGTTCTGGATGATGTTTGGAGCACAGAGAAATGGGAAGACTTGAAGTCTGTTTTGCTTTGTGGAGGTGGAACAAAAGGATCAGCAGTTTTGGTGACTAGCCGAATTGACAGTGTTGCATCTGTCATGGGAACATGGCCAATTCATCGCTTGTCACCATTATCTGAGGATGATAATTGGTTATTGTTCAAATACCATGCATTTGGATCAAACAAAGTGGAGATCACAGAGCTTGTTGCAATTGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCTCCTCTTGCATCCAAAGCACTTGGAAGCCTTTTGCGCAATAAACATGAGGAAATACAGTGGCTCAATGTATTGCAAAGTAAGCTTTGGGACATACTTGAGGAGGATTCTATTATTGTACGTGCTTTGAAAATAAGCTACTTCAATTTGAACTTGTCATTAAGAAGATGCTTTGCTTTTTGTGCCTTCTTCCCCGAAGATTTTCGAATGGAAAAGGAACAACTTATTCATCTTTGGATGGCCAACGGTTTGATCAAATCCAAGGGGAAGTTGGAGATCGAGGATGTTGGTAATGAGGCTTGGGAGCAATTATGGCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGACTTATTTCATGAACTTGCCCAATCCATAATGGGACAAGAGTGCACAGTTTATGATGAGCCTTCAAGCTTGACCAGTTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACGAGAGAAAGATGTAAACATGGATCTCTTCAAGAAAGCTGAATCCTTGAGGACTTTGATCAATCTTCCTCCATTATATCATGGTACTCTTCCATTTGATCCTTACAATTTTTGTGGGTTGCCACCATTTAATTCTCTCCGTGCTTTATGTACAAATGCTTATCAACTCTCAGCACTCAAGAGTTTAACGCATTTGAGGTACTTAAATCTGCGTGGGAGCTGTATCACAACACTACCTGAATGCATTTCAAGGTTGCAAAAATTGCAGATTCTCAAGTTAGAAGGATGTGTGTATCTTTGTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATGTCCTAATTAACGACTGTAATTCATTAGTAGAGATGCCTCCGAATATGGGGGAGTTGAAATGCTTGAAAACATTGAATCTTTTTATTGTGGAGAGAAAGGCAGGATATGGCTTATCAGAGTTACGTGATTTACAGCTTGGAGGCAAACTACACATCAAGGGGCTTGAAAATGTGGTAAATGAAGATGATGGTAGAGATGCTAATTTGAGTGCTAAGAAGAATTTGCAAAACTTATACCTGTCATGGGACTCCTCTAATTCATTGTGTGCTGCCAATTCTGAGAGAATACTTGAAGCCCTTCAGCCTCCCTCTAATCTCAAGAGTTTTGGGATGAACGGTTACAGTGGAGTTCGTTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTGGAGCCTAGTAATGGTGATACTTTATGATTGCAAGAACTGTGAGCACCTTCCTCCACTTGGTAAACTACCGCATCTAACCATTCTTTATGTTTCTGGAATGAAAGATTTGAAGTACATCGATGATGACTCGTACAATGGCGTGGATGAGAAGGCTTTTAAATCTTTGAAGGACCTGTACTTATCAAATCTGCCAAACTTGGAAGGGATGTTACGAGATGAAAGAGTAGAAATGCTTCCACTTGTTTCTAAATTAAAGGTCTCATGTGTCCCCAAGATTAAATTACCACTCCTTCCATCTCTAGAGTACTTTTGTATTGAAGGAACAGGGTCAGACTCTGATCATAGTGAGAGTGAAGGCATGGCTTACATCCCAGAGTCTATTGTGCTGAATATGCGTCATATTAAGCATCTCCGCATTTCAGGTTTCCCTAAACTGAAGGCATTACCCCATGAATTAAGCAGCCTCAGCTCGCTACAGAAGTTAGATGTTTATGAGTGTGATGAACTTGAATCTTTTTCGGAGAATGTGATGCAAGGACTGTGTTCTCTTCGAAGTTTGAGGATTGGTTGGTGTAAGAAACTGAAATCGTTGTCTGAAGGTGTGGGAAATCTGACTTGTCTGGAGAGCCTTGAGATCATGAAATGTCCAAAGCTGGTGTCTCTACCGAGTAGCATGAATAAGCTAGTTTCCCTTCGTCACATTTTCATCGATTCTTGTGGTACATTGCCAGAAGGCTTGCAACATGTCCCTTCCCTCCAAAGTTTGGATGTGTTTGACTTGCGTTCAATTCCTGAGTGGTTGGGTGACCTAACTTCTCTTCAAGAGTTAGACCTCTCCTGTGAGGGGTTAAGGTCACTACCCAGTAGCATCCGAAACCTGACAAACTTGCGTGAGCTATCTATTGATGGGTGCCATAAGGAGCTGCAGAAGAGATGTAAAAGAGGAACAGGAGAGGATTGGCAAACCATTGCTCACATCCCTCAAGTCGAATTGATTCCCATGCGTCAACAAACATTTTCTGATAAAATCACATCCAAATGGATAGAGTGGCAGCTAACAAGAGACAGAAACCGTCATCATTTGGCTAAAGATGGTAGATTTGACTGTGTGGTTGAAGGGCTTTGA 3408 0.4158 MAADLLLEIVIENLRTFVQDELATIWGVNSQIQELSRNLAAIHAVLQDAEEKQIRDHAVKLWLQNLSDAAHVLDDILDECSIQSNRLQSQHCLTRFHPMTIMSRRDIGKRMKEMVDRFRRIDEERRRFELRGRVPETQQEDEAWRQTSSGTTEHHVYGRDQDILKIVEVLSRSADSSDDLSVYPIVGMGGLGKTTLARRVFKDSKVMKHFDLRIWVCVSTDFNIMKILHSIVECVSEQNPNLSTLEALQNKVQEILQGKRYLLVLDDVWSTEKWEDLKSVLLCGGGTKGSAVLVTSRIDSVASVMGTWPIHRLSPLSEDDNWLLFKYHAFGSNKVEITELVAIGKEIVKKCGGSPLASKALGSLLRNKHEEIQWLNVLQSKLWDILEEDSIIVRALKISYFNLNLSLRRCFAFCAFFPEDFRMEKEQLIHLWMANGLIKSKGKLEIEDVGNEAWEQLWQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGQECTVYDEPSSLTSLSTRVHHVTCLKREKDVNMDLFKKAESLRTLINLPPLYHGTLPFDPYNFCGLPPFNSLRALCTNAYQLSALKSLTHLRYLNLRGSCITTLPECISRLQKLQILKLEGCVYLCCLPKHLTQLKDLRHVLINDCNSLVEMPPNMGELKCLKTLNLFIVERKAGYGLSELRDLQLGGKLHIKGLENVVNEDDGRDANLSAKKNLQNLYLSWDSSNSLCAANSERILEALQPPSNLKSFGMNGYSGVRLPSWMQNTSILWSLVMVILYDCKNCEHLPPLGKLPHLTILYVSGMKDLKYIDDDSYNGVDEKAFKSLKDLYLSNLPNLEGMLRDERVEMLPLVSKLKVSCVPKIKLPLLPSLEYFCIEGTGSDSDHSESEGMAYIPESIVLNMRHIKHLRISGFPKLKALPHELSSLSSLQKLDVYECDELESFSENVMQGLCSLRSLRIGWCKKLKSLSEGVGNLTCLESLEIMKCPKLVSLPSSMNKLVSLRHIFIDSCGTLPEGLQHVPSLQSLDVFDLRSIPEWLGDLTSLQELDLSCEGLRSLPSSIRNLTNLRELSIDGCHKELQKRCKRGTGEDWQTIAHIPQVELIPMRQQTFSDKITSKWIEWQLTRDRNRHHLAKDGRFDCVVEGL 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61833g00002 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 414 IPR027417 -
Stsc61833g00002 1135 SUPERFAMILY RNI-like 854 1066 - -
Stsc61833g00002 1135 Gene3D - 138 307 IPR027417 -
Stsc61833g00002 1135 Pfam Rx N-terminal domain 7 91 IPR041118 -
Stsc61833g00002 1135 FunFam Probable disease resistance protein At1g63360 400 488 - -
Stsc61833g00002 1135 Gene3D - 394 488 IPR036388 -
Stsc61833g00002 1135 Coils Coil 32 52 - -
Stsc61833g00002 1135 SMART LRR_typ_2 579 602 IPR003591 -
Stsc61833g00002 1135 SMART LRR_typ_2 1031 1054 IPR003591 -
Stsc61833g00002 1135 FunFam Probable disease resistance protein At1g61300 138 308 - -
Stsc61833g00002 1135 PRINTS Disease resistance protein signature 914 930 - -
Stsc61833g00002 1135 PRINTS Disease resistance protein signature 182 197 - -
Stsc61833g00002 1135 PRINTS Disease resistance protein signature 351 365 - -
Stsc61833g00002 1135 PRINTS Disease resistance protein signature 255 269 - -
Stsc61833g00002 1135 Gene3D Ribonuclease Inhibitor 666 857 IPR032675 -
Stsc61833g00002 1135 Gene3D Ribonuclease Inhibitor 858 998 IPR032675 -
Stsc61833g00002 1135 Gene3D - 7 126 - -
Stsc61833g00002 1135 CDD RX-CC_like 3 117 IPR038005 -
Stsc61833g00002 1135 Gene3D Ribonuclease Inhibitor 1001 1074 IPR032675 -
Stsc61833g00002 1135 Gene3D Ribonuclease Inhibitor 557 662 IPR032675 -
Stsc61833g00002 1135 SUPERFAMILY L domain-like 477 863 - -
Stsc61833g00002 1135 PANTHER DISEASE RESISTANCE PROTEIN RP 32 821 IPR044974 GO:0006952
Stsc61833g00002 1135 Pfam NB-ARC domain 160 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61833g00002 Stsc-Chr61833 6095 9587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61833g00002 179 793 WRKY Transcription Factor Family AT5G45050 25.689 2.44e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61833g00002 - - adu:127747420 1337.78