Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61801g00003 ATGGACTTGAATGCTACTACTTATTGTCTCCAAACTTTTGCTGCCATTTTAGGTTTCTTAATCGCATTCTTCACCATAAGGTCCATTAGATCACATAATAATGGATCCAAGAAAAGAAATGGCAAAACCAAAGTTCCTGAAATACCAGGTGGTTTACCCATCATAGGTCACCTCCATCTTCTCAATGACAAAATCCCATATTTTAGAACCTTCTCAACCATGGCTGAAAATTACGGCTCAATCTTCGCACTCCGCCTCGGTTGTCACCCCACAATCATGGTTAGCAGCGCAGAGCTCGCCAAGGAATGCCTCACAACTAAAGACAGAGTCTTTGCCTCGCGGCCGGACACGGCCGCAGGCAGGTTCTTGGGCTATAACAACGCGATTTTTGGTCTCGCGCCATACGGACCGTACTGGCGCGAGATCAGAAAAATCGCGACGCTAGAGCTCCTCTCGAGTTACAGGCTTGAGAAGCTGAAACACATCAGAGACGGAGAAATTTACGCTCTTGTGAAAGATTTGTTCAGTTTTAGTAACTCGAATAATTTAGTTAGTATAAGTAATTTGTTAGAGCACATGACATTTAACATCAATGTGCAGATGATAGCAGGGAAAAGGTTCAGTGATGAAGCAATTAATGAAGAAGATAGTGAAGGATGGAGATTAAGGAAAGCAATTAGAGATGCTACTTATCTTTTTGGTGTTTTTGTTGTGGCTGATGCTATTCCATGGCTTGGTTGGTTTGATTTTCAAGGTTATGTGGGTTTTATGAAGAGAACAACTAAGGAATTGGACTCTATTCTTCATAGGTGGATGGATGATCATATGAGAAAACGAGGTGAAGATAATGATGATGAGAATGGTAGTAAATCTGTGAATGATTTCTTGGATGTGCTAATTTCAGCATTTGAAGAAAATGATGAGATTTATGGCCATAAGAGGGACATAGTTCTCAAAGCAACAACACTGATGCTAGTCCTAACTGGATCAGGAAGCACAGCCATGACATTAACATGGTCACTATCATTACTCTTAAACCACCCAACA 1047 0.4117 MDLNATTYCLQTFAAILGFLIAFFTIRSIRSHNNGSKKRNGKTKVPEIPGGLPIIGHLHLLNDKIPYFRTFSTMAENYGSIFALRLGCHPTIMVSSAELAKECLTTKDRVFASRPDTAAGRFLGYNNAIFGLAPYGPYWREIRKIATLELLSSYRLEKLKHIRDGEIYALVKDLFSFSNSNNLVSISNLLEHMTFNINVQMIAGKRFSDEAINEEDSEGWRLRKAIRDATYLFGVFVVADAIPWLGWFDFQGYVGFMKRTTKELDSILHRWMDDHMRKRGEDNDDENGSKSVNDFLDVLISAFEENDEIYGHKRDIVLKATTLMLVLTGSGSTAMTLTWSLSLLLNHPT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61801g00003 349 PANTHER CYTOCHROME P450 82C3-RELATED 19 348 - -
Stsc61801g00003 349 Pfam Cytochrome P450 46 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 SUPERFAMILY Cytochrome P450 49 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 Gene3D Cytochrome P450 31 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 PRINTS E-class P450 group I signature 337 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61801g00003 349 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61801g00003 Stsc-Chr61801 13778 15989 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61801g00003 43 348 Cytochrome P450 AT3G25180 42.157 1.49e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61801g00003 K17961 - gmx:100787489 441.425