Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61785g00002 ATGTCTGTCTCCCCAAAACACTCAGCTTGTACTCTTCTTGACTTGAACTGCAATGAAGCAACAAGTGATGTTGTTTACTTGGATTCCAACATTCACAACAACAGCTATGAATCCAATGACGGTGATTCGAGTACTGCTCTTCTATGGAGTGACGACTCCGGTGTCGATGAAGAAGAACATCTCTTGAGCTTGTTTGACTCTGAACATGATCATGTTAAGGAAAGAACGAGGTTGCTAGTTCAACTTCGCAAGACCAAGTGGCTGAGGAATGCGCGAGAAGAAGCCATAAATTGGATCCTAAAGGTATGTGCATACTACAGTTTTAGACCAGAGACGGCATATGTTTCAGCGATTTATCTTGATCGTTTCCTTTTTTCTCGCACATTGAAGCAAGATAAAGCATGGCCTATGCAGCTGCTATCAGTAGCATGCTTGTCGCTAGCGGCGAAAATGGAGGAATCCAAGGTGCCTCTTCTGTTGGACCTGCAAATGGTTGAGTCAAGGTTCTTGTTTAAGCCGAAAACAGTTCAGAGGATGGAGCTTCTGGTTATGGCAACTCTCAAGTGGCGACTCGGAGTTATAGTGAAACCTTTCGATTTTGCTCATCTTTTCATTGCTAGACTTCCCTGTTCAGCTTCCACATTGTTGGGAGATTTAAATTATGTTGCTTCTCGTGTGTCTGACGTTATCATTAAAACATGTCTAGTTACGGATTTCTTGGAGATTTCACCTTCCACAATAGCAGCAGCTGCTCTGTTATGTGTAACAGATCAATACGTTGATGACCTTAAACTATATGGCTTCCACAAGAATATAAGAATTGATATGGTGCATAAATGTTACAATCTTATGAAGAAGACAATTCAAAGATCGGAGTATCTTTTACCAAAGACAACTACTCTTCAGTTAATGCCCCTAAGCCCAACTTGTGTGCTTGATCTTGCAGATTTGCAAGACAGTCACAGTGCTACTGACGAATGA 981 0.4169 MSVSPKHSACTLLDLNCNEATSDVVYLDSNIHNNSYESNDGDSSTALLWSDDSGVDEEEHLLSLFDSEHDHVKERTRLLVQLRKTKWLRNAREEAINWILKVCAYYSFRPETAYVSAIYLDRFLFSRTLKQDKAWPMQLLSVACLSLAAKMEESKVPLLLDLQMVESRFLFKPKTVQRMELLVMATLKWRLGVIVKPFDFAHLFIARLPCSASTLLGDLNYVASRVSDVIIKTCLVTDFLEISPSTIAAAALLCVTDQYVDDLKLYGFHKNIRIDMVHKCYNLMKKTIQRSEYLLPKTTTLQLMPLSPTCVLDLADLQDSHSATDE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61785g00002 326 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Stsc61785g00002 326 SMART cyclin_7 97 185 IPR013763 -
Stsc61785g00002 326 Pfam Cyclin, N-terminal domain 68 191 IPR006671 -
Stsc61785g00002 326 CDD CYCLIN_AtCycD-like_rpt2 195 284 - -
Stsc61785g00002 326 Gene3D - 74 192 - -
Stsc61785g00002 326 Gene3D - 66 259 - -
Stsc61785g00002 326 PANTHER CYCLINS 66 290 IPR039361 -
Stsc61785g00002 326 SUPERFAMILY Cyclin-like 57 191 IPR036915 -
Stsc61785g00002 326 FunFam D6-type cyclin 75 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61785g00002 Stsc-Chr61785 7278 9613 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61785g00002 13 297 Core Cell Cycle Gene Families AT1G70210 38.384 2.71e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61785g00002 K18810 - gmx:100799323 364.77