Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61769g00002 ATGGTTTCATTATATTTGACAGGAGGACCACAGCCGCTTTCATGGTCACTGAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGACTAAGTTTTCTTCACAATGCCAAATCACAAGTCATATACCGTGATTTCAAAGCTTCTAATATCCTACTAGATGCTGAGTTCAATGCAAAACTCTCTGATTTTGGCTTAGCAAAGGCTGGTCCTACTGGTGATAGAACTCACGTCTCTACTGAAGTTATGGGTACTCGTGGATATGCCGCACCTGAATATGTTGCAACAGGGCGGCTAACAGCCAAAAGTGATGTATATAGCTTTGGGGTTGTGTTGCTTGAGCTGTTGTCTGGAAGACGTGCTGTTGATAGAACAAAAGCTGGTGTGGAGCAGGACCTTGTAGACTGGGCAAAACCATATTTAGGTGACAAAAGAAAACTATTTCGGATTATGGACACCAAGCTCGAGGGTCAATACCCACAGAAAGGAGCCTACATGGCTGCTACTCTTGCTTTAAAATGCCTTGATCGTGAACCCAAGGCAAGGCCTCCAATGACAGAGGTTTTAGACACCCTTGAGCAGATAGAAGTCCCCAAAACTGCAGCGCGAAACTCTCAATCAGGGCAGAAGAGAGTACATGTTCCTCCAAGCCCAAGGAAGTCTCCTGCACAGAACCCGTCCCCTATGAATGTTACTCGAACTTCATACCCATTGCCACCTCGCCGAGAATCTCCTCATGTACACTAA 741 0.4615 MVSLYLTGGPQPLSWSLRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTEVMGTRGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQDLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYMAATLALKCLDREPKARPPMTEVLDTLEQIEVPKTAARNSQSGQKRVHVPPSPRKSPAQNPSPMNVTRTSYPLPPRRESPHVH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61769g00002 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Stsc61769g00002 246 PANTHER OS01G0588500 PROTEIN-RELATED 13 194 - -
Stsc61769g00002 246 MobiDBLite consensus disorder prediction 197 246 - -
Stsc61769g00002 246 FunFam Serine/threonine-protein kinase PBS1 3 209 - -
Stsc61769g00002 246 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61769g00002 246 Pfam Protein kinase domain 23 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61769g00002 246 Gene3D Transferase(Phosphotransferase) domain 1 2 213 - -
Stsc61769g00002 246 SUPERFAMILY Protein kinase-like (PK-like) 9 199 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61769g00002 Stsc-Chr61769 7409 9386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61769g00002 4 190 Glycoside Hydrolase AT3G07070 55.319 2.22e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc61769g00002 Pkinase 1.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61769g00002 - - gmx:100809778 392.119