Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61760g00003 ATGCCCCTCCTCTTCACCCCAACACCAATATCCTCCTTCACCCTTTTCAATCTCCTTAATATTCTCAATTTCATCATTGCCTATTATACAATAATGGGGATACTTTCAACTTCCTTAGACACAAATTGGTGGGTGCTTACACTCCCAGCCATAGTAGGAACACATCATAACATGCTTAACAATCTAATCTTTGTAGCCCTAATTGCACTTCTCACCATTTGGATTTTAGGTTGGGCATTCCCAGTGGGAGGAGTAGCTTGGAGAAATGGCAGGAACCAAATGGGCCCTAGTCCAATTCCAGGGCCCAAAGGGTTCCCAATCTTTGGTATCTTATTTCACTTGAACCATGGCCTTCCACACCAAACCCTAGCTTCCATGGCTTCCACCCTCTCCGCTACACAACTCATGGCCTTCAGCTTAGGCTCCACACCTGCAGTTATCACCTCAAACCCTAACATCGCGCGCGAAATCTTGAATTCACCCTATTTCGCCGATCGTCCCATTAAAGAATCCGCGAAAAGCTTGATGTTCAGTCGAGCCATTGGGTTTGCACCCAATGGCGCGTACTGGCGTTTGCTTCGTAAGGTTGCATCCACCCATATGTTTTCTCCTAAACGCATCGTGGCCCATGAAGCTGGTCGCTTGCATGATTGCGCCGCCATGTTACAAGCCGTGGCTCAAGAACAATCCCAAAATGGAGTCGTTTTCTTAAGAAAACACCTCCAAGATGCGGCTCTTAACAACATTATGGGAACCGTTTTCGGAAAAAGGTACAACTTTGAAGAACAAAACCAGAATAGCTATGAACAAGTTGAAGAGCTTCGTGAGATGGTGAGGGAAGGGTTTGAGCTCTTAGGAGCTTTCAACTTGTGTGATTATGTGCCATGGATGAGGTTCTTCTATGACCCTCTTCACATCAAAGAACGGTGTTCTTGTCTTACTCCTCGAGTGAAGAGGTTTGTGAAGAGGGTTTTGGATGAACACCGAATGGTGGGTCCGTACAAGAAGAATATTTCTGATGGATCAGACTTCGTGGATGTGCTGCTCTCATTGGAAGGGGATGAGAAGCTCCAAGATGACGACATGATTGCAGTTTTATGGGAGATGATATTCCGTGGCACAGACACAACAGCACTTCTAACAGAATGGGTAATGGCGGAGCTTGTTTTGAACCAACAAATTCAGGCCAGGCTTCGCCACGAGCTTGACAATGCTTTTGGGGACAATAACCACCTTACATATGCTGACGTGGCAAAACTAACTTATCTTGATGCCATCGTGAAAGAGACATTGCGGTTACACCCAATCGGTCCACTTCTTTCATGGGCCCGCTTGTCCACATCAGATGTCCAGCTCAGCAATGGCATGGTGGTCCCTGCAAACACCACCACAATGGTGAACATGTGGGCCATAACTCACCACCCAAGCGTGTGGGAGGATCCATTTGAATTTAAACCCGAGAGATTTTTGAAAGGTGAAGGAGGCATTGACTTTGATATAAAGGGCGTTGACCTTAGGCTTGCACCATTCGGTGCCGGGCGTAGGGTTTGCCCTGGCAAGAACCTTGGGCTTGCCACTGTGACCCTTTGGGTGGCTAAGTTGGTTCACCGCTTTGAATGGCTACAAAACATGGCTAACCCTGTTGACCTGACCGAGGTGCTCAAGCTTTCTTGTGAGATGAAAACCCCTCTCAAAGTTGTGGCTATACCGAGAGTTGCTTAA 1722 0.471 MPLLFTPTPISSFTLFNLLNILNFIIAYYTIMGILSTSLDTNWWVLTLPAIVGTHHNMLNNLIFVALIALLTIWILGWAFPVGGVAWRNGRNQMGPSPIPGPKGFPIFGILFHLNHGLPHQTLASMASTLSATQLMAFSLGSTPAVITSNPNIAREILNSPYFADRPIKESAKSLMFSRAIGFAPNGAYWRLLRKVASTHMFSPKRIVAHEAGRLHDCAAMLQAVAQEQSQNGVVFLRKHLQDAALNNIMGTVFGKRYNFEEQNQNSYEQVEELREMVREGFELLGAFNLCDYVPWMRFFYDPLHIKERCSCLTPRVKRFVKRVLDEHRMVGPYKKNISDGSDFVDVLLSLEGDEKLQDDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQQIQARLRHELDNAFGDNNHLTYADVAKLTYLDAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWAITHHPSVWEDPFEFKPERFLKGEGGIDFDIKGVDLRLAPFGAGRRVCPGKNLGLATVTLWVAKLVHRFEWLQNMANPVDLTEVLKLSCEMKTPLKVVAIPRVA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61760g00003 573 PRINTS E-class P450 group I signature 361 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 244 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 424 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 507 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 467 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS E-class P450 group I signature 517 540 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 SUPERFAMILY Cytochrome P450 99 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 Pfam Cytochrome P450 100 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 CDD CYP78 131 564 - -
Stsc61760g00003 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 510 519 IPR017972 GO:0005506|GO:0016705
Stsc61760g00003 573 FunFam Cytochrome P450 78A5 91 571 - -
Stsc61760g00003 573 PRINTS P450 superfamily signature 508 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS P450 superfamily signature 372 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PRINTS P450 superfamily signature 517 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 Gene3D Cytochrome P450 90 570 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61760g00003 573 PANTHER CYTOCHROME P450 78A7-RELATED 41 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61760g00003 Stsc-Chr61760 8742 11694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61760g00003 38 567 Cytochrome P450 AT5G09970 63.415 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61760g00003 K20619 - qsa:O6P43_008036 749.584